Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Double-stranded RNA-binding

Term: IPR001159  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene81100 SustainPine v2.0 543
AutoFact: Beta-D-glucan exohydrolase, isoenzyme ExoII n=3 Tax=Triticeae RepID=Q42835_HORVU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycosyl hydrolase family 3 n terminal domain containing expressed 0.0
C-terminus
sp_v2.0_unigene81318 SustainPine v2.0 735
AutoFact: Glycosyl hydrolase-like protein (Fragment) n=6 Tax=Picea sitchensis RepID=E0Z5X8_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycosyl hydrolase-like protein 0.0
Internal
sp_v2.0_unigene81377 SustainPine v2.0 510
AutoFact: Glycosyl hydrolase-like protein (Fragment) n=6 Tax=Picea sitchensis RepID=E0Z5X8_PICSI 5.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycosyl hydrolase-like protein 9.73097e-40
Internal
sp_v2.0_unigene81441 SustainPine v2.0 411
AutoFact: Fructose-bisphosphate aldolase n=2 Tax=Picea sitchensis RepID=A9NUC9_PICSI 2.0e-18
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fructose bisphosphate aldolase 4.10598e-18
C-terminus
sp_v2.0_unigene81451 SustainPine v2.0 311
AutoFact: Beta-D-glucosidase n=1 Tax=Tropaeolum majus RepID=O82074_TROMA 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycosyl hydrolase family 3 n terminal domain containing expressed 2.72357e-28
C-terminus
sp_v2.0_unigene81510 SustainPine v2.0 1086
AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=A9NMQ0_PICSI 0.0
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fructose-bisphosphate aldolase 0.0
Complete
sp_v2.0_unigene81662 SustainPine v2.0 374
AutoFact: Fructose-bisphosphate aldolase n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RX76_PHYPA 2.0e-18
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fructose bisphosphate aldolase 5.44359e-18
Putative C-terminus
sp_v2.0_unigene81685 SustainPine v2.0 648
AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=A9NMQ0_PICSI 0.0
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at3g52930-like protein 0.0
N-terminus
sp_v2.0_unigene81712 SustainPine v2.0 787
AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=A9NMQ0_PICSI 0.0
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fructose-bisphosphate aldolase 0.0
C-terminus
sp_v2.0_unigene81841 SustainPine v2.0 352
AutoFact: Probable fructose-bisphosphate aldolase 3, chloroplastic n=2 Tax=Arabidopsis RepID=ALFC3_ARATH 3.0e-33
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fructose-bisphosphate class i 6.32372e-33
Internal
sp_v2.0_unigene81970 SustainPine v2.0 561
AutoFact: exo-beta-glucanase [Lilium longiflorum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lysosomal beta glucosidase-like 0.0
C-terminus
sp_v2.0_unigene81980 SustainPine v2.0 575
AutoFact: Glycosyl hydrolase-like protein (Fragment) n=13 Tax=Picea sitchensis RepID=E0ZH83_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycosyl hydrolase-like protein 0.0
Internal
sp_v2.0_unigene81990 SustainPine v2.0 494
AutoFact: Fructose-bisphosphate aldolase n=2 Tax=Picea sitchensis RepID=A9NUC9_PICSI 0.0
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene82321 SustainPine v2.0 367
AutoFact: Glycosyl hydrolase-like protein (Fragment) n=6 Tax=Picea sitchensis RepID=E0Z5X8_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycosyl hydrolase-like protein 0.0
Internal
sp_v2.0_unigene85300 SustainPine v2.0 793
AutoFact: Glycosyl hydrolase-like protein (Fragment) n=6 Tax=Picea sitchensis RepID=E0Z5X8_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycosyl hydrolase-like protein 0.0
Internal
sp_v2.0_unigene85808 SustainPine v2.0 388
AutoFact: dsRNA-binding protein LH [Brassica rapa subsp. chinensis] 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dsrna-binding protein 1.11563e-21
Complete
sp_v2.0_unigene89584 SustainPine v2.0 471
AutoFact: Fructose-bisphosphate aldolase n=2 Tax=Picea sitchensis RepID=A9NP14_PICSI 0.0
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fructose-bisphosphate aldolase 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain