Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: RNA helicase, ATP-dependent, DEAD-box, conserved site

Term: IPR000629  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene57365 SustainPine v2.0 371
• AutoFact: Unassigned protein
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: copia-type polyprotein 1.41969e-34
Putative C-terminus
sp_v2.0_unigene58338 SustainPine v2.0 237
• AutoFact: DEAD-box ATP-dependent RNA helicase 22 n=3 Tax=Oryza sativa RepID=RH22_ORYSJ 1.0e-18
• FL-Next: Isoform 2 of DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa subsp. japonica GN=Os09g0383400 0.0
• Blast2go: dead-box atp-dependent rna helicase 22-like 2.943e-22
Internal
sp_v2.0_unigene58742 SustainPine v2.0 226
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9S033_RICCO 3.0e-22
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 50; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: dead-box atp-dependent rna helicase 50-like 1.50864e-26
Internal
sp_v2.0_unigene59461 SustainPine v2.0 860
• AutoFact: Subtilisin-like serine protease n=5 Tax=Arabidopsis RepID=Q8LGA0_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: subtilisin-like protease-like 0.0
Internal
sp_v2.0_unigene59963 SustainPine v2.0 669
• AutoFact: Serine protease like protein n=3 Tax=Arabidopsis RepID=Q56WY6_ARATH 1.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: subtilisin-like protease 0.0
C-terminus
sp_v2.0_unigene60857 SustainPine v2.0 600
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: sant dna-binding domain-containing protein 4.38789e-39
Putative C-terminus
sp_v2.0_unigene61541 SustainPine v2.0 486
• AutoFact: GRP multi-domain protein 2.0e-13
unknown
sp_v2.0_unigene61864 SustainPine v2.0 1128
• AutoFact: DEAD-box ATP-dependent RNA helicase 31 n=3 Tax=Arabidopsis RepID=RH31_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna helicase 0.0
C-terminus
sp_v2.0_unigene61979 SustainPine v2.0 586
• AutoFact: Os03g0113500 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q0DVT8_ORYSJ 4.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.01061e-20
Complete
sp_v2.0_unigene62167 SustainPine v2.0 500
• AutoFact: putative WD-40 repeat protein [Arabidopsis thaliana] gb|AAM14874.1| putative WD-40 repeat protein [Arabidopsis thaliana] 6.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: wd-40 repeat protein 0.0
Internal
sp_v2.0_unigene62363 SustainPine v2.0 871
• AutoFact: Helicase, C-terminal [Medicago truncatula] 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 2.41298e-36
C-terminus
sp_v2.0_unigene62431 SustainPine v2.0 561
• AutoFact: FAP multi-domain protein 2.0e-17
Coding
sp_v2.0_unigene62643 SustainPine v2.0 530
• AutoFact: DEAD-box ATP-dependent RNA helicase 2 n=6 Tax=BEP clade RepID=RH2_ORYSJ 7.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene63307 SustainPine v2.0 501
• AutoFact: putative DEAD/DEAH box helicase [Narcissus pseudonarcissus] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: eukaryotic initiation factor 4a-10-like 0.0
N-terminus
sp_v2.0_unigene63588 SustainPine v2.0 757
• AutoFact: Ebp2 domain containing protein 1.0e-05
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 28; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: atp-dependent rna helicase 4.23086e-11
C-terminus
sp_v2.0_unigene63781 SustainPine v2.0 588
• AutoFact: Xylem serine proteinase 1, putative n=1 Tax=Ricinus communis RepID=B9T4J8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: subtilisin-like protease-like 0.0
Putative C-terminus
sp_v2.0_unigene64571 SustainPine v2.0 570
• AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 20 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 1.57829e-28
Putative C-terminus
sp_v2.0_unigene65225 SustainPine v2.0 448
• AutoFact: cytochrome P450 86B1 [Arabidopsis thaliana] sp|Q9FMY1.1|C86B1_ARATH RecName: Full=Cytochrome P450 86B1 gb|AAK29622.1|AF345898_1 CYP86B1 [Arabidopsis thaliana] dbj|BAB11174.1| cytochrome P450-like protein [Arabidopsis thaliana] gb|AAN72056.1| cytochrome P4 6.00036e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cytochrome p450 0.0
C-terminus
sp_v2.0_unigene65424 SustainPine v2.0 472
• AutoFact: pfam10545, MADF_DNA_bdg, Alcohol dehydrogenase transcription factor Myb/SANT-like 8.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 4.9464e-36
Putative N-terminus
sp_v2.0_unigene67430 SustainPine v2.0 503
• AutoFact: RecName: Full=ATP-dependent RNA helicase-like protein DB10 dbj|BAA03763.1| RNA helicase like protein DB10 [Nicotiana sylvestris] 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 3.32607e-39
Putative C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain