Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: RNA helicase, ATP-dependent, DEAD-box, conserved site

Term: IPR000629  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene37421 SustainPine v2.0 778
AutoFact: Cytochrome P450 n=1 Tax=Populus trichocarpa RepID=B9IHM1_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 0.0
Putative C-terminus
sp_v2.0_unigene37599 SustainPine v2.0 592
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.71707e-33
Putative C-terminus
sp_v2.0_unigene37818 SustainPine v2.0 703
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: PREDICTED: uncharacterized protein LOC100241773 isoform 2 [Vitis vinifera] 0.0
Internal
sp_v2.0_unigene38294 SustainPine v2.0 597
AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 8.00001e-41
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: copia-type polyprotein 0.0
C-terminus
sp_v2.0_unigene38393 SustainPine v2.0 433
AutoFact: DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana] sp|O22907.2|RH24_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 24 gb|AAL15330.1| At2g47330/T8I13.17 [Arabidopsis thaliana] gb|AAB63833.2| putative ATP-dependent RNA helicase [Arabidop 0.0
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 24; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dead-box atp-dependent rna helicase 24-like 0.0
Internal
sp_v2.0_unigene38991 SustainPine v2.0 871
AutoFact: Cytochrome P450 monooxygenase CYP86A24 n=1 Tax=Glycine max RepID=Q2LAK8_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 0.0
N-terminus
sp_v2.0_unigene39086 SustainPine v2.0 477
AutoFact: Cytochrome P450 n=1 Tax=Populus trichocarpa RepID=B9IHM1_POPTR 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 1.13241e-35
N-terminus
sp_v2.0_unigene39350 SustainPine v2.0 780
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y141_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Internal
sp_v2.0_unigene40438 SustainPine v2.0 559
AutoFact: putative cytochrome P450 protein [Oryza sativa Japonica Group] gb|AAP54351.1| Cytochrome P450 family protein, expressed [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 86b1 0.0
C-terminus
sp_v2.0_unigene40671 SustainPine v2.0 222
AutoFact: OSJNBa0011L07.15 protein n=5 Tax=Oryza sativa RepID=Q7XR86_ORYSJ 4.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trihelix transcription factor gt-2-like 1.41234e-30
Internal
sp_v2.0_unigene40751 SustainPine v2.0 301
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 22 7.0e-31
FL-Next: Isoform 2 of DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa subsp. japonica GN=Os09g0383400 0.0
Blast2go: dead-box atp-dependent rna helicase 22 1.08495e-37
Internal
sp_v2.0_unigene41642 SustainPine v2.0 853
AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: copia-type polyprotein 0.0
C-terminus
sp_v2.0_unigene41998 SustainPine v2.0 417
AutoFact: mitochondrial intermediate peptidase [Arabidopsis thaliana] gb|AED96095.1| mitochondrial intermediate peptidase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial intermediate peptidase 0.0
Internal
sp_v2.0_unigene43859 SustainPine v2.0 448
AutoFact: Cucumisin, putative n=1 Tax=Ricinus communis RepID=B9R9K9_RICCO 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.0844e-27
Internal
sp_v2.0_unigene48791 SustainPine v2.0 284
AutoFact: DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana] sp|O22907.2|RH24_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 24 gb|AAL15330.1| At2g47330/T8I13.17 [Arabidopsis thaliana] gb|AAB63833.2| putative ATP-dependent RNA helicase [Arabidop 3.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 24-like 1.39009e-33
Putative C-terminus
sp_v2.0_unigene50714 SustainPine v2.0 714
AutoFact: Cytochrome P450, putative n=1 Tax=Ricinus communis RepID=B9SST9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 94a1 0.0
Putative C-terminus
sp_v2.0_unigene51295 SustainPine v2.0 375
AutoFact: WS02812.CR_E18 SS-IB-A-FL-13 Picea sitchensis cDNA clone WS02812_E18 3, mRNA sequence. 4.0e-35
FL-Next: tr=Subtilisin-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: xylem serine proteinase 1 3.38002e-39
Internal
sp_v2.0_unigene52409 SustainPine v2.0 290
AutoFact: DEAD-box ATP-dependent RNA helicase 18 [Arabidopsis thaliana] sp|Q9FLB0.1|RH18_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 18 dbj|BAB09988.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AED90875.1| DEAD-box ATP-dependent 9.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 18-like 6.30339e-35
Internal
sp_v2.0_unigene55223 SustainPine v2.0 184
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9S714_RICCO 2.0e-11
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 21; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: unnamed protein product [Vitis vinifera] 5.15308e-09
Internal
sp_v2.0_unigene56757 SustainPine v2.0 439
AutoFact: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Fragment) n=3 Tax=Vitis RepID=E6Y5B3_9ROSI 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bisphosphoglycerate-independent phosphoglycerate mutase 1.16945e-36
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain