Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: RNA helicase, ATP-dependent, DEAD-box, conserved site

Term: IPR000629  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene31192 SustainPine v2.0 688
AutoFact: cytochrome P450, family 86, subfamily C, polypeptide 4 [Arabidopsis thaliana] gb|AAD31067.1|AC007357_16 Strong similarity to gi|3313615 F21J9.9 from Arabidopsis thaliana and is a member of the PF|00067 Cytochrome P450 family gb|AEE28976.1| cytochrome P450 4.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 2.54859e-36
C-terminus
sp_v2.0_unigene32012 SustainPine v2.0 328
AutoFact: putative ATP-dependent RNA helicase [Oryza sativa] 2.0e-29
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 17; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dead-box atp-dependent rna helicase 17-like 1.26237e-37
Putative C-terminus
sp_v2.0_unigene32860 SustainPine v2.0 509
AutoFact: Inhibitor_I9 domain containing protein 1.0e-16
FL-Next: tr=Subtilisin-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: subtilisin-like protease-like 0.0
N-terminus
sp_v2.0_unigene32997 SustainPine v2.0 676
AutoFact: copper ion transmembrane transporter [Arabidopsis thaliana] gb|AAM67286.1| unknown [Arabidopsis thaliana] gb|AEC09465.1| copper ion transmembrane transporter [Arabidopsis thaliana] 9.99995e-41
FL-Next: sp=Probable DEAD-box ATP-dependent RNA helicase 48; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: copper ion transmembrane transporter 0.0
N-terminus
sp_v2.0_unigene33678 SustainPine v2.0 756
AutoFact: DEAD-box ATP-dependent RNA helicase 45 n=2 Tax=Arabidopsis thaliana RepID=RH45_ARATH 6.0e-40
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 45; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dead-box atp-dependent rna helicase 42 1.14747e-39
C-terminus
sp_v2.0_unigene33707 SustainPine v2.0 970
AutoFact: subtilase family protein [Arabidopsis thaliana] dbj|BAB09208.1| subtilisin-like protease [Arabidopsis thaliana] dbj|BAC42684.1| putative subtilisin-like protease [Arabidopsis thaliana] gb|AAO64099.1| putative subtilisin [Arabidopsis thaliana] gb|AED95280. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: subtilisin-like protease-like 0.0
Internal
sp_v2.0_unigene33761 SustainPine v2.0 993
AutoFact: Subtilisin-like protein n=1 Tax=Picea abies RepID=Q40764_PICAB 0.0
FL-Next: tr=Subtilisin-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: subtilisin-like protease-like 0.0
Putative N-terminus
sp_v2.0_unigene34057 SustainPine v2.0 422
AutoFact: peptide alpha-N-acetyltransferase [Arabidopsis thaliana] dbj|BAB10599.1| unnamed protein product [Arabidopsis thaliana] gb|AAK96745.1| Unknown protein [Arabidopsis thaliana] gb|AAL47392.1| unknown protein [Arabidopsis thaliana] gb|AAM64579.1| silencing gr 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: silencing group b protein 2.93086e-26
N-terminus
sp_v2.0_unigene34677 SustainPine v2.0 783
AutoFact: DEAD-box ATP-dependent RNA helicase 38 [Arabidopsis thaliana] sp|Q93ZG7.2|RH38_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 38; AltName: Full=Low expression of osmotically-responsive genes 4 protein; AltName: Full=Protein CRYOPHYTE emb|CAB64214 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 38-like 0.0
Putative N-terminus
sp_v2.0_unigene34739 SustainPine v2.0 453
AutoFact: DEAD-box ATP-dependent RNA helicase 16 [Arabidopsis thaliana] sp|Q9SW44.1|RH16_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 16 emb|CAB45452.1| RNA helicase (RH16) [Arabidopsis thaliana] emb|CAB80208.1| RNA helicase (RH16) [Arabidopsis thaliana] 6.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 0.0
N-terminus
sp_v2.0_unigene34842 SustainPine v2.0 1004
AutoFact: WS0336.C21_F15 WS-SE-N-A-18 Picea glauca cDNA clone WS0336_F15 3, mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Putative C-terminus
sp_v2.0_unigene34928 SustainPine v2.0 329
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SW84_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 42-like 0.0
Internal
sp_v2.0_unigene35645 SustainPine v2.0 786
AutoFact: DEAD-box ATP-dependent RNA helicase 36 [Arabidopsis thaliana] sp|Q9SA27.1|RH36_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 36 gb|AAD34681.1|AC006341_9 Similar to gb|L13612 DEAD-box protein (dbp45A) from Drosophila melanogaster and is a member 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 36-like 0.0
Putative Complete
sp_v2.0_unigene35913 SustainPine v2.0 694
AutoFact: putative ATP-dependent RNA helicase [Oryza sativa] 1.0e-08
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 17; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dead-box atp-dependent rna helicase 17-like 1.19001e-10
C-terminus
sp_v2.0_unigene36191 SustainPine v2.0 574
AutoFact: putative transcription factor [Oryza sativa Japonica Group] gb|ABB47886.2| expressed protein [Oryza sativa Japonica Group] 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.12104e-44
Internal
sp_v2.0_unigene36327 SustainPine v2.0 672
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9S466_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 18-like 0.0
Internal
sp_v2.0_unigene36519 SustainPine v2.0 981
AutoFact: subtilisin-like proteinase-like [Oryza sativa Japonica Group] dbj|BAB90087.1| subtilisin-like proteinase-like [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: subtilisin-like protease-like 0.0
C-terminus
sp_v2.0_unigene36629 SustainPine v2.0 938
AutoFact: putative DEAD-box protein abstrakt [Trifolium pratense] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box protein abstrakt 0.0
N-terminus
sp_v2.0_unigene37073 SustainPine v2.0 671
AutoFact: Integrase n=1 Tax=Cucumis melo subsp. melo RepID=A6YTD9_CUCME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 0.0
C-terminus
sp_v2.0_unigene37139 SustainPine v2.0 608
AutoFact: subtilisin-like serine protease AIR3 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: subtilisin-like protease 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain