Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: RNA helicase, ATP-dependent, DEAD-box, conserved site

Term: IPR000629  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene20302 SustainPine v2.0 1007
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SW84_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 42-like 0.0
Putative N-terminus
sp_v2.0_unigene20319 SustainPine v2.0 789
AutoFact: ATP-dependent RNA helicase like protein [Arabidopsis thaliana] emb|CAB78627.1| ATP-dependent RNA helicase like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead box-like rna helicase 0.0
N-terminus
sp_v2.0_unigene20416 SustainPine v2.0 809
AutoFact: Probable DEAD-box ATP-dependent RNA helicase 48 n=3 Tax=Arabidopsis RepID=RH48_ARATH 7.0e-32
FL-Next: sp=Probable DEAD-box ATP-dependent RNA helicase 48; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 1.40933e-36
N-terminus
sp_v2.0_unigene20558 SustainPine v2.0 353
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RGR4_RICCO 3.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead box atp-dependent rna 1.93707e-09
Internal
sp_v2.0_unigene20864 SustainPine v2.0 527
AutoFact: WS03929.C21_I18 SS-B-24 Picea sitchensis cDNA clone WS03929_I18 3', mRNA sequence. 0.0
Putative coding
sp_v2.0_unigene21088 SustainPine v2.0 2440
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 20 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 0.0
Complete
sp_v2.0_unigene23101 SustainPine v2.0 2752
AutoFact: Subtilisin-like serine protease n=5 Tax=Arabidopsis RepID=Q8LGA0_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: subtilisin-like protease-like 0.0
Complete
sp_v2.0_unigene23154 SustainPine v2.0 580
AutoFact: DEAD BOX RNA helicase RH15-like protein [Arabidopsis thaliana] 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.61966e-39
N-terminus
sp_v2.0_unigene23409 SustainPine v2.0 1192
AutoFact: DEAD-box ATP-dependent RNA helicase 56 n=2 Tax=Arabidopsis thaliana RepID=F4JWF6_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 56 0.0
C-terminus
sp_v2.0_unigene23423 SustainPine v2.0 1290
AutoFact: DEAD-box ATP-dependent RNA helicase 40 [Arabidopsis thaliana] sp|Q9SQV1.1|RH40_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 40 gb|AAF08584.1|AC011623_17 putative RNA helicase [Arabidopsis thaliana] gb|AEE74400.1| DEAD-box ATP-dependent RNA heli 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 14 0.0
Putative C-terminus
sp_v2.0_unigene23459 SustainPine v2.0 314
AutoFact: PPase [Hevea brasiliensis] 6.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pyrophosphate-energized vacuolar membrane proton 2.06788e-28
Internal
sp_v2.0_unigene23542 SustainPine v2.0 3265
AutoFact: putative subtilisin serine protease [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: subtilisin-like protease-like 0.0
Complete
sp_v2.0_unigene23892 SustainPine v2.0 1553
AutoFact: Pyrophosphate-energized vacuolar membrane proton pump n=21 Tax=Magnoliophyta RepID=AVP_VIGRR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pyrophosphate-energized vacuolar membrane proton pump 0.0
Putative N-terminus
sp_v2.0_unigene24412 SustainPine v2.0 464
AutoFact: translational initiation factor eIF-4A [Zea mays] gb|AAB67607.1| translational initiation factor eIF-4A [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic initiation factor 4a 0.0
Internal
sp_v2.0_unigene25478 SustainPine v2.0 1807
AutoFact: putative U1 snRNP 70K protein [Trifolium pratense] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: u1 small nuclear ribonucleoprotein 70 kda-like 0.0
Complete
sp_v2.0_unigene25872 SustainPine v2.0 2162
AutoFact: protease Do-like 2 [Arabidopsis thaliana] sp|O82261.2|DEGP2_ARATH RecName: Full=Protease Do-like 2, chloroplastic; Flags: Precursor gb|AAG41447.1|AF326865_1 putative DegP2 protease [Arabidopsis thaliana] gb|AAK14061.1|AF245171_1 DegP2 protease [Arabidopsi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protease do-like chloroplastic-like 0.0
Complete
sp_v2.0_unigene25903 SustainPine v2.0 2563
AutoFact: Cucumisin, putative n=1 Tax=Ricinus communis RepID=B9SRB6_RICCO 0.0
FL-Next: tr=Subtilisin-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: subtilisin-like protease-like 0.0
C-terminus
sp_v2.0_unigene25920 SustainPine v2.0 606
AutoFact: Cytochrome P450, putative n=1 Tax=Ricinus communis RepID=B9SCQ6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 0.0
C-terminus
sp_v2.0_unigene26080 SustainPine v2.0 1301
AutoFact: putative DEAD-box protein abstrakt [Trifolium pratense] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box protein abstrakt 0.0
C-terminus
sp_v2.0_unigene26090 SustainPine v2.0 1033
AutoFact: DEAD-box ATP-dependent RNA helicase 37 n=2 Tax=Oryza sativa Japonica Group RepID=RH37_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 37-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain