Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: RNA helicase, ATP-dependent, DEAD-box, conserved site

Term: IPR000629  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene14676 SustainPine v2.0 742
AutoFact: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=2 Tax=Solanaceae RepID=PMGI_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphoglycerate mutase 0.0
C-terminus
sp_v2.0_unigene14986 SustainPine v2.0 816
AutoFact: putative DEAD-box protein abstrakt [Trifolium pratense] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box protein abstrakt 0.0
Internal
sp_v2.0_unigene16150 SustainPine v2.0 1771
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
C-terminus
sp_v2.0_unigene16298 SustainPine v2.0 2001
AutoFact: Eukaryotic initiation factor 4A-1 n=67 Tax=Magnoliophyta RepID=IF4A1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic initiation factor 4a 0.0
Complete
sp_v2.0_unigene16568 SustainPine v2.0 3369
AutoFact: putative subtilisin serine protease [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: subtilisin-like protease-like 0.0
Putative Complete
sp_v2.0_unigene16924 SustainPine v2.0 1271
AutoFact: Pyrophosphate-energized vacuolar membrane proton pump n=21 Tax=Magnoliophyta RepID=AVP_VIGRR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vacuolar h+-translocating inorganic pyrophosphatase 0.0
C-terminus
sp_v2.0_unigene17027 SustainPine v2.0 1336
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RGR4_RICCO 7.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead box atp-dependent rna 7.41694e-36
C-terminus
sp_v2.0_unigene17100 SustainPine v2.0 1361
AutoFact: T-complex protein 1 epsilon subunit [Mesembryanthemum crystallinum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: t-complex protein 1 subunit epsilon 0.0
C-terminus
sp_v2.0_unigene17155 SustainPine v2.0 2677
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 9 0.0
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 53; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dead-box atp-dependent rna helicase 53-like 0.0
Complete
sp_v2.0_unigene17350 SustainPine v2.0 1141
AutoFact: Caltractin n=1 Tax=Atriplex nummularia RepID=CATR_ATRNU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: caltractin 0.0
Complete
sp_v2.0_unigene17375 SustainPine v2.0 539
AutoFact: DEAD-box ATP-dependent RNA helicase 56 n=2 Tax=Arabidopsis thaliana RepID=F4JWF6_ARATH 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 9.64493e-20
N-terminus
sp_v2.0_unigene17531 SustainPine v2.0 2398
AutoFact: MIP-T3 multi-domain protein 8.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box-like wd repeat-containing protein tbl1xr1-like 0.0
Complete
sp_v2.0_unigene17814 SustainPine v2.0 2913
AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Protease Do-like 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protease do-like 9-like 0.0
Complete
sp_v2.0_unigene17837 SustainPine v2.0 1474
AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 37-like 0.0
C-terminus
sp_v2.0_unigene18552 SustainPine v2.0 2963
AutoFact: serine protease-like protein [Nicotiana tabacum] 0.0
FL-Next: tr=Subtilisin-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: subtilisin-like protease-like 0.0
C-terminus
sp_v2.0_unigene18885 SustainPine v2.0 1342
AutoFact: DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana] sp|Q9FNM7.2|RH26_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 26 gb|AED91329.1| DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna helicase 0.0
C-terminus
sp_v2.0_unigene18994 SustainPine v2.0 1264
AutoFact: putative DEAD box-like RNA helicase [Oryza sativa Japonica Group] dbj|BAD19277.1| putative DEAD box-like RNA helicase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead box-like rna helicase 0.0
C-terminus
sp_v2.0_unigene19111 SustainPine v2.0 844
AutoFact: DEAD-box ATP-dependent RNA helicase 46 n=2 Tax=Arabidopsis RepID=F4K6V1_ARATH 6.0e-16
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 46; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dead-box atp-dependent rna helicase 46 1.55344e-19
N-terminus
sp_v2.0_unigene19289 SustainPine v2.0 398
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v2.0_unigene19919 SustainPine v2.0 2665
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SAD3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead box rna helicase 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain