Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: RNA helicase, ATP-dependent, DEAD-box, conserved site

Term: IPR000629  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene80035 SustainPine v2.0 565
• AutoFact: Eukaryotic translation initiation factor (Fragment) n=2 Tax=Viridiplantae RepID=Q1WLT9_CHLIN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene81547 SustainPine v2.0 249
• AutoFact: Eukaryotic initiation factor 4A-like protein n=2 Tax=Chlamydomonadales RepID=A8IP17_CHLRE 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: translational initiation factor 4a-1 2.69929e-25
C-terminus
sp_v2.0_unigene81675 SustainPine v2.0 443
• AutoFact: Pyrophosphatase n=2 Tax=Amaranthaceae RepID=Q42651_BETVU 5.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pyrophosphate-energized vacuolar membrane proton pump-like 2.52234e-44
N-terminus
sp_v2.0_unigene81845 SustainPine v2.0 367
• AutoFact: vacuolar proton-inorganic pyrophosphatase [Triticum aestivum] 4.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v2.0_unigene81888 SustainPine v2.0 478
• AutoFact: Pyrophosphate-energized vacuolar membrane proton pump 1 n=10 Tax=core eudicotyledons RepID=AVP1_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pyrophosphate-energized vacuolar membrane proton pump 1 0.0
Internal
sp_v2.0_unigene82272 SustainPine v2.0 633
• AutoFact: eukaryotic initiation factor 4A [Pennisetum glaucum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: eukaryotic initiation factor 4a 0.0
Putative N-terminus
sp_v2.0_unigene82698 SustainPine v2.0 408
• AutoFact: Eukaryotic translation initiation factor (Fragment) n=2 Tax=Viridiplantae RepID=Q1WLT9_CHLIN 6.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 3.48218e-38
C-terminus
sp_v2.0_unigene82740 SustainPine v2.0 843
• AutoFact: eukaryotic initiation factor 4A [Oryza sativa Japonica Group] dbj|BAB21260.1| eukaryotic initiation factor 4A [Oryza sativa] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene82771 SustainPine v2.0 481
• AutoFact: RecName: Full=Eukaryotic initiation factor 4A; Short=eIF-4A; AltName: Full=ATP-dependent RNA helicase eIF4A 5.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.35117e-27
N-terminus
sp_v2.0_unigene82802 SustainPine v2.0 441
• AutoFact: RecName: Full=Eukaryotic initiation factor 4A; Short=eIF-4A; AltName: Full=ATP-dependent RNA helicase eIF4A 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 3.1911e-28
N-terminus
sp_v2.0_unigene82825 SustainPine v2.0 518
• AutoFact: Eukaryotic translation initiation factor (Fragment) n=2 Tax=Viridiplantae RepID=Q1WLT9_CHLIN 3.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.01773e-16
C-terminus
sp_v2.0_unigene83093 SustainPine v2.0 720
• AutoFact: Eukaryotic translation initiation factor (Fragment) n=2 Tax=Viridiplantae RepID=Q1WLT9_CHLIN 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.48664e-41
Putative Complete
sp_v2.0_unigene83354 SustainPine v2.0 538
• AutoFact: Gag-pol polyprotein, putative [Solanum demissum] 4.99997e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 0.0
Putative C-terminus
sp_v2.0_unigene83368 SustainPine v2.0 259
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q4JQ43_GINBI 3.0e-20
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: reverse transcriptase 1.63176e-26
Internal
sp_v2.0_unigene84468 SustainPine v2.0 482
• AutoFact: Inhibitor_I9 domain containing protein 1.0e-14
• FL-Next: tr=Subtilisin-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: subtilisin-like protease precursor 0.0
Putative N-terminus
sp_v2.0_unigene85856 SustainPine v2.0 515
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7SJI2_VITVI 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
sp_v2.0_unigene86502 SustainPine v2.0 311
• AutoFact: putative ethylene-responsive RNA helicase [Oryza sativa Japonica Group] 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead box atp-dependent rna 2.58343e-26
Internal
sp_v2.0_unigene91274 SustainPine v2.0 418
• AutoFact: cytochrome P450 86B1 [Arabidopsis thaliana] gb|AAM97029.1| cytochrome P450-like protein [Arabidopsis thaliana] gb|AAN15497.1| cytochrome P450-like protein [Arabidopsis thaliana] dbj|BAE99010.1| cytochrome P450 like protein [Arabidopsis thaliana] gb|AED912 1.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cytochrome p450 86b1-like 0.0
C-terminus
sp_v2.0_unigene91569 SustainPine v2.0 792
• AutoFact: pfam00082, Peptidase_S8, Subtilase family 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: subtilisin-like protease-like 0.0
Internal
sp_v2.0_unigene91911 SustainPine v2.0 987
• AutoFact: subtilisin-like protease [Arabidopsis thaliana] sp|O65351.1|SUBL_ARATH RecName: Full=Subtilisin-like protease; AltName: Full=Cucumisin-like serine protease; Flags: Precursor gb|AAK25995.1|AF360285_1 putative subtilisin serine protease ARA12 [Arabidopsis t 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: subtilisin-like protease 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain