Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: RNA helicase, ATP-dependent, DEAD-box, conserved site

Term: IPR000629  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene67528 SustainPine v2.0 604
AutoFact: ethylene-responsive RNA helicase [Solanum lycopersicum] 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead box rna helicase 0.0
Internal
sp_v2.0_unigene67538 SustainPine v2.0 465
AutoFact: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Mesembryanthemum crystallinum RepID=PMGI_MESCR 7.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bp5a partial 0.0
C-terminus
sp_v2.0_unigene67687 SustainPine v2.0 590
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RRD9_RICCO 4.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chloroplast biogenesis 19 0.0
Internal
sp_v2.0_unigene67855 SustainPine v2.0 277
AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group] 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 5.86439e-31
Internal
sp_v2.0_unigene68381 SustainPine v2.0 438
AutoFact: eIF-4A n=4 Tax=Poaceae RepID=B5AKW1_PENAM 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 9.41915e-34
N-terminus
sp_v2.0_unigene68569 SustainPine v2.0 433
AutoFact: Centrin n=3 Tax=Tetraodontidae RepID=Q8QFS1_TAKRU 1.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 8.50525e-16
C-terminus
sp_v2.0_unigene68882 SustainPine v2.0 700
AutoFact: Xylem serine proteinase 1, putative n=1 Tax=Ricinus communis RepID=B9SHW1_RICCO 0.0
FL-Next: tr=Subtilisin-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: subtilisin-like protease-like 0.0
Internal
sp_v2.0_unigene69233 SustainPine v2.0 273
AutoFact: Inorganic diphosphatase, H+-translocating, vacuolar membrane n=15 Tax=Poaceae RepID=Q67WN5_ORYSJ 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring u-box domain-containing protein 1.0025e-11
Internal
sp_v2.0_unigene70404 SustainPine v2.0 278
AutoFact: Integrase n=1 Tax=Cucumis melo subsp. melo RepID=A6YTD9_CUCME 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase family protein 4.60787e-23
Internal
sp_v2.0_unigene74315 SustainPine v2.0 296
AutoFact: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=5 Tax=Malpighiales RepID=PMGI_RICCO 5.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bisphosphoglycerate-independent phosphoglycerate mutase 4.2039e-45
Putative N-terminus
sp_v2.0_unigene74363 SustainPine v2.0 345
AutoFact: Helicase, C-terminal; Zinc finger, CCHC-type; GUCT n=1 Tax=Medicago truncatula RepID=Q2HUZ8_MEDTR 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead deah box helicase family expressed 0.0
Internal
sp_v2.0_unigene76483 SustainPine v2.0 349
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 3.75755e-19
C-terminus
sp_v2.0_unigene76641 SustainPine v2.0 332
AutoFact: Serine protease-like protein n=1 Tax=Nicotiana tabacum RepID=Q8H0H9_TOBAC 4.0e-18
FL-Next: tr=Subtilisin-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: subtilisin-like protease-like 4.94177e-21
Internal
sp_v2.0_unigene77018 SustainPine v2.0 720
AutoFact: dead-box helicase [Platanus x acerifolia] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box protein abstrakt 0.0
Internal
sp_v2.0_unigene77701 SustainPine v2.0 650
AutoFact: Caltractin, putative n=1 Tax=Ricinus communis RepID=B9SC54_RICCO 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: caltractin 1.99405e-42
N-terminus
sp_v2.0_unigene78116 SustainPine v2.0 370
AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 7.00005e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene79136 SustainPine v2.0 461
AutoFact: Eukaryotic initiation factor 4A-3 n=8 Tax=Embryophyta RepID=IF4A3_NICPL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic initiation factor 0.0
C-terminus
sp_v2.0_unigene79138 SustainPine v2.0 489
AutoFact: ethylene-responsive RNA helicase [Solanum lycopersicum] 8.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 8.26766e-44
Putative C-terminus
sp_v2.0_unigene79402 SustainPine v2.0 476
AutoFact: Vacuolar-type H-pyrophosphatase n=1 Tax=Medicago truncatula RepID=B6DXD7_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vacuolar h+-pyrophosphatase 0.0
Internal
sp_v2.0_unigene79528 SustainPine v2.0 245
AutoFact: Inorganic diphosphatase, H+-translocating, vacuolar membrane n=15 Tax=Poaceae RepID=Q67WN5_ORYSJ 3.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain