Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: RecF/RecN/SMC

Term: IPR003395  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene37922 SustainPine v2.0 491
AutoFact: DNA repair protein RAD50 [Arabidopsis thaliana] sp|Q9SL02.2|RAD50_ARATH RecName: Full=DNA repair protein RAD50; Short=AtRAD50 gb|AAF36810.1|AF168748_1 DNA repair-recombination protein [Arabidopsis thaliana] gb|AAD15407.2| putative RAD50 DNA repair protein 7.0e-30
FL-Next: sp=DNA repair protein RAD50; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair protein rad50 8.63725e-40
Internal
sp_v2.0_unigene38346 SustainPine v2.0 322
AutoFact: SMC_N domain containing protein 2.0e-06
FL-Next: tr=Structural maintenance of chromosome, putative; Ricinus communis (Castor bean). 0.0
Blast2go: chromosome associated protein 1.40117e-38
Internal
sp_v2.0_unigene38904 SustainPine v2.0 302
AutoFact: Protein MIM n=3 Tax=Arabidopsis RepID=Q9FII7_ARATH 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: protein mim 0.0
Internal
sp_v2.0_unigene43575 SustainPine v2.0 399
AutoFact: Protein MIM n=3 Tax=Arabidopsis RepID=Q9FII7_ARATH 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: structural maintenance of chromosomes protein 6-like 5.70176e-27
N-terminus
sp_v2.0_unigene59373 SustainPine v2.0 669
AutoFact: putative RAD50 DNA repair protein [Arabidopsis thaliana] 0.0
FL-Next: sp=DNA repair protein RAD50; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair protein rad50 0.0
Internal
sp_v2.0_unigene61872 SustainPine v2.0 1099
AutoFact: Phosphoglycerate kinase n=1 Tax=Picea sitchensis RepID=B8LKQ1_PICSI 0.0
FL-Next: sp=Phosphoglycerate kinase; Pinus pinaster (Maritime pine). 0.0
Blast2go: phosphoglycerate kinase 0.0
N-terminus
sp_v2.0_unigene74448 SustainPine v2.0 275
AutoFact: structural maintenance of chromosomes 5 [Arabidopsis thaliana] emb|CAC01791.1| putative protein [Arabidopsis thaliana] gb|AED92224.1| structural maintenance of chromosomes 5 [Arabidopsis thaliana] 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: structural maintenance of chromosomes protein 7.34186e-26
C-terminus
sp_v2.0_unigene85464 SustainPine v2.0 481
AutoFact: Structural maintenance of chromosomes (SMC)-like protein n=2 Tax=Arabidopsis RepID=Q9M1T3_ARATH 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: structural maintenance of chromosomes 1 5.76214e-42
Internal
sp_v2.0_unigene85919 SustainPine v2.0 603
AutoFact: putative SMC protein [Oryza sativa Japonica Group] gb|EEC79459.1| hypothetical protein OsI_20467 [Oryza sativa Indica Group] gb|EEE64226.1| hypothetical protein OsJ_19059 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: structural maintenance of chromosomes protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain