Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Phytochrome chromophore binding site

Term: IPR013516  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene2076 SustainPine v2.0 1338
AutoFact: Viroid symptom modulation protein n=2 Tax=Solanum RepID=Q9M728_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein kinase oxi1-like 0.0
C-terminus
sp_v2.0_unigene2190 SustainPine v2.0 3364
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RCZ5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase g11a-like 0.0
Complete
sp_v2.0_unigene3942 SustainPine v2.0 2638
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SWQ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase g11a-like 0.0
Complete
sp_v2.0_unigene3953 SustainPine v2.0 1523
AutoFact: Phytochrome n=43 Tax=Spermatophyta RepID=PHY_PINSY 0.0
FL-Next: sp=Phytochrome; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phytochrome p 0.0
Putative N-terminus
sp_v2.0_unigene4987 SustainPine v2.0 1021
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase 0.0
C-terminus
sp_v2.0_unigene6042 SustainPine v2.0 1078
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine protein kinase oxi1 0.0
Putative Complete
sp_v2.0_unigene6648 SustainPine v2.0 510
AutoFact: [T] COG2202 FOG: PAS/PAC domain 9.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: non-specific serine threonine protein kinase 0.0
N-terminus
sp_v2.0_unigene6813 SustainPine v2.0 520
AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome o 0.0
Internal
sp_v2.0_unigene7984 SustainPine v2.0 421
AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome o 0.0
Internal
sp_v2.0_unigene8312 SustainPine v2.0 2363
AutoFact: Phytochrome n=1 Tax=Marchantia paleacea var. diptera RepID=Q9AVP3_MARPA 0.0
FL-Next: sp=Phytochrome; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phytochrome 0.0
C-terminus
sp_v2.0_unigene8616 SustainPine v2.0 655
AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome 0.0
Internal
sp_v2.0_unigene8788 SustainPine v2.0 618
AutoFact: protein kinase [Spinacia oleracea] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phototropin 2 0.0
Putative N-terminus
sp_v2.0_unigene9948 SustainPine v2.0 1651
AutoFact: Caffeate O-methyltransferase n=4 Tax=Picea RepID=Q5NDD5_PICAB 0.0
FL-Next: tr=Caffeate O-methyltransferase; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: caffeate o-methyltransferase 0.0
Putative Complete
sp_v2.0_unigene11489 SustainPine v2.0 1599
AutoFact: serine/threonine-protein kinase AtPK1/AtPK6 [Arabidopsis thaliana] sp|P42818.1|KPK1_ARATH RecName: Full=Serine/threonine-protein kinase AtPK1/AtPK6; AltName: Full=Ribosomal-protein S6 kinase homolog 1 gb|AAG51351.1|AC012562_12 putative ribosomal-protein S 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine protein kinase 2 0.0
Complete
sp_v2.0_unigene12342 SustainPine v2.0 458
AutoFact: putative protein kinase [Arabidopsis thaliana] 3.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein kinase oxi1-like 0.0
Putative C-terminus
sp_v2.0_unigene12671 SustainPine v2.0 1747
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SWQ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase 0.0
C-terminus
sp_v2.0_unigene12966 SustainPine v2.0 1292
AutoFact: Phytochrome N (Fragment) n=12 Tax=Pinaceae RepID=Q9FSD5_PINSY 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome n 0.0
Internal
sp_v2.0_unigene14642 SustainPine v2.0 1873
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RKW8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phototropin 2 0.0
C-terminus
sp_v2.0_unigene19183 SustainPine v2.0 522
AutoFact: Phytochrome (Fragment) n=1 Tax=Pseudotsuga menziesii RepID=Q40917_PSEMZ 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome p 0.0
Internal
sp_v2.0_unigene26305 SustainPine v2.0 952
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SWQ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain