Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Phytochrome A/B/C/D/E

Term: IPR012129  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene3953 SustainPine v2.0 1523
AutoFact: Phytochrome n=43 Tax=Spermatophyta RepID=PHY_PINSY 0.0
FL-Next: sp=Phytochrome; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phytochrome p 0.0
Putative N-terminus
sp_v2.0_unigene6813 SustainPine v2.0 520
AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome o 0.0
Internal
sp_v2.0_unigene7984 SustainPine v2.0 421
AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome o 0.0
Internal
sp_v2.0_unigene8312 SustainPine v2.0 2363
AutoFact: Phytochrome n=1 Tax=Marchantia paleacea var. diptera RepID=Q9AVP3_MARPA 0.0
FL-Next: sp=Phytochrome; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phytochrome 0.0
C-terminus
sp_v2.0_unigene8616 SustainPine v2.0 655
AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome 0.0
Internal
sp_v2.0_unigene9948 SustainPine v2.0 1651
AutoFact: Caffeate O-methyltransferase n=4 Tax=Picea RepID=Q5NDD5_PICAB 0.0
FL-Next: tr=Caffeate O-methyltransferase; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: caffeate o-methyltransferase 0.0
Putative Complete
sp_v2.0_unigene12966 SustainPine v2.0 1292
AutoFact: Phytochrome N (Fragment) n=12 Tax=Pinaceae RepID=Q9FSD5_PINSY 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome n 0.0
Internal
sp_v2.0_unigene19183 SustainPine v2.0 522
AutoFact: Phytochrome (Fragment) n=1 Tax=Pseudotsuga menziesii RepID=Q40917_PSEMZ 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome p 0.0
Internal
sp_v2.0_unigene30571 SustainPine v2.0 633
AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 6.0e-13
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome c 5.88746e-14
C-terminus
sp_v2.0_unigene39675 SustainPine v2.0 370
AutoFact: Phytochrome N (Fragment) n=12 Tax=Pinaceae RepID=Q9FSD5_PINSY 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome n 0.0
Internal
sp_v2.0_unigene40431 SustainPine v2.0 274
AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 9.99967e-42
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome n 0.0
Internal
sp_v2.0_unigene41963 SustainPine v2.0 557
AutoFact: Phytochrome N (Fragment) n=12 Tax=Pinaceae RepID=Q9FSD5_PINSY 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome 4 0.0
Internal
sp_v2.0_unigene43293 SustainPine v2.0 328
AutoFact: Phytochrome n=43 Tax=Spermatophyta RepID=PHY_PINSY 2.0e-10
FL-Next: sp=Phytochrome; Pinus sylvestris (Scots pine). 0.0
Blast2go: phytochrome 2 3.77599e-10
Internal
sp_v2.0_unigene43331 SustainPine v2.0 171
AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 9.0e-20
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome p 8.16454e-20
Internal
sp_v2.0_unigene43600 SustainPine v2.0 396
AutoFact: Phytochrome P (Fragment) n=1 Tax=Pinus kwangtungensis var. kwangtungensis RepID=F2Q6G9_9CONI 9.94922e-44
FL-Next: sp=Phytochrome; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phytochrome p 0.0
Internal
sp_v2.0_unigene61151 SustainPine v2.0 381
AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 2.0e-26
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome c 3.10761e-26
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain