Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Winged helix-turn-helix transcription repressor DNA-binding

Term: IPR011991  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene37975 SustainPine v2.0 575
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 0.0
Internal
sp_v2.0_unigene38790 SustainPine v2.0 783
• AutoFact: O-methyltransferase n=3 Tax=Pinus RepID=O24287_PINRA 7.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: caffeate o-methyltransferase 0.0
Putative Complete
sp_v2.0_unigene38920 SustainPine v2.0 614
• AutoFact: phototropic-responsive NPH3-like protein [Arabidopsis thaliana] gb|AAG52282.1|AC019018_19 putative non-phototropic hypocotyl; 25081-26618 [Arabidopsis thaliana] gb|AAO00852.1| putative non-phototropic hypocotyl [Arabidopsis thaliana] gb|AAP49519.1| At1g52 2.99878e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
sp_v2.0_unigene38989 SustainPine v2.0 346
• AutoFact: Root phototropism protein 2 [Arabidopsis thaliana] ref|NP_001077982.1| Root phototropism protein 2 [Arabidopsis thaliana] dbj|BAD43060.1| unknown protein [Arabidopsis thaliana] gb|AEC08402.1| Root phototropism protein 2 [Arabidopsis thaliana] gb|AEC08403. 9.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: root phototropism protein 3.37678e-30
Internal
sp_v2.0_unigene39186 SustainPine v2.0 478
• AutoFact: cullin 3B [Arabidopsis thaliana] sp|Q9C9L0.1|CUL3B_ARATH RecName: Full=Cullin-3B; Short=AtCUL3b gb|AAG52544.1|AC013289_11 putative cullin; 66460-68733 [Arabidopsis thaliana] gb|AEE34961.1| cullin 3B [Arabidopsis thaliana] 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene40295 SustainPine v2.0 281
• AutoFact: High-affinity cationic amino acid transporter 1 n=3 Tax=Andropogoneae RepID=B6U1T8_MAIZE 5.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v2.0_unigene40922 SustainPine v2.0 477
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=5 Tax=Oryza sativa RepID=Q2R1L3_ORYSJ 3.00004e-41
• FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: retrotransposon ty3-gypsy subclass 5.55685e-41
Internal
sp_v2.0_unigene41116 SustainPine v2.0 652
• AutoFact: Os08g0156900 protein n=4 Tax=Oryza sativa RepID=Q6ZD95_ORYSJ 0.0
• FL-Next: sp=Meiotic recombination protein SPO11-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: meiotic recombination protein spo11-2 0.0
C-terminus
sp_v2.0_unigene43403 SustainPine v2.0 558
• AutoFact: HSF domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJ32_MALDO 6.0e-10
• FL-Next: sp=Heat stress transcription factor B-4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: heat stress transcription factor b-4 8.60686e-11
Putative C-terminus
sp_v2.0_unigene43832 SustainPine v2.0 662
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=5 Tax=Oryza sativa RepID=Q2R1L3_ORYSJ 2.00386e-43
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Blast2go: retrotransposon ty3-gypsy subclass 1.79366e-43
Putative C-terminus
sp_v2.0_unigene43973 SustainPine v2.0 349
• AutoFact: caffeic acid O-methyltransferase 4.0e-32
• FL-Next: tr=Caffeate O-methyltransferase; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: caffeic acid o-methyltransferase 1.11122e-38
Internal
sp_v2.0_unigene45021 SustainPine v2.0 391
• AutoFact: Heat shock factor protein HSF8, putative n=1 Tax=Ricinus communis RepID=B9SNT1_RICCO 4.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: heat shock factor protein 7.7633e-34
Internal
sp_v2.0_unigene46496 SustainPine v2.0 243
• AutoFact: Cullin 1A n=2 Tax=Nicotiana tabacum RepID=Q711G8_TOBAC 5.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cullin-like protein1 2.00921e-25
Internal
sp_v2.0_unigene47039 SustainPine v2.0 242
• AutoFact: Heat shock transcription factor (HSF) n=3 Tax=Glycine max RepID=Q00M68_SOYBN 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: heat stress transcription factor b-4 8.5457e-27
Internal
sp_v2.0_unigene49052 SustainPine v2.0 586
• AutoFact: Root phototropism protein, putative n=1 Tax=Ricinus communis RepID=B9SKU3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: btb poz domain-containing protein at1g30440-like 0.0
N-terminus
sp_v2.0_unigene50579 SustainPine v2.0 238
• AutoFact: Root phototropism protein, putative n=1 Tax=Ricinus communis RepID=B9SKU3_RICCO 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: at1g30440-like protein 2.52094e-42
Internal
sp_v2.0_unigene50948 SustainPine v2.0 284
• AutoFact: O-methyltransferase, family 2; Dimerisation n=1 Tax=Medicago truncatula RepID=Q2HTB3_MEDTR 3.0e-23
• FL-Next: tr=Caffeic acid O-methyltransferase; Pinus taeda (Loblolly pine). 0.0
• Blast2go: caffeic acid 3-o-methyltransferase 2.23802e-29
Internal
sp_v2.0_unigene53017 SustainPine v2.0 423
• AutoFact: Transcription factor DP [Arabidopsis thaliana] sp|Q9FNY2.1|DPB_ARATH RecName: Full=Transcription factor-like protein DPB; AltName: Full=DP-like protein B; Short=AtDPbB; AltName: Full=E2F dimerization partner protein B emb|CAC15484.1| DP-like protein [Arab 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor e2 dimerization partner protein 0.0
Internal
sp_v2.0_unigene53409 SustainPine v2.0 190
• AutoFact: E2F transcription factor-like E2FE n=3 Tax=Arabidopsis RepID=E2FE_ARATH 1.0e-11
• FL-Next: Isoform 2 of E2F transcription factor-like E2FE OS=Arabidopsis thaliana GN=E2FE 0.0
• Blast2go: protein dp-e2f-like 1 2.58309e-16
Internal
sp_v2.0_unigene54371 SustainPine v2.0 520
• AutoFact: NPH3 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: root phototropism protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain