Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Winged helix-turn-helix transcription repressor DNA-binding

Term: IPR011991  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene23856 SustainPine v2.0 1741
• AutoFact: Histone H1-like protein (Fragment) n=15 Tax=Picea sitchensis RepID=E0ZG68_PICSI 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone h1-like protein 2.10941e-32
Complete
sp_v2.0_unigene23914 SustainPine v2.0 703
• AutoFact: Histone H1-like protein (Fragment) n=15 Tax=Picea sitchensis RepID=E0ZG68_PICSI 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone h1-like protein 1.84603e-16
N-terminus
sp_v2.0_unigene24807 SustainPine v2.0 1489
• AutoFact: Caffeate O-methyltransferase n=4 Tax=Picea RepID=Q5NDD5_PICAB 0.0
• FL-Next: tr=Caffeate O-methyltransferase; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: caffeic acid 3-o-methyltransferase 0.0
Complete
sp_v2.0_unigene24857 SustainPine v2.0 2166
• AutoFact: Root phototropism protein, putative n=1 Tax=Ricinus communis RepID=B9SKU3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: btb poz domain-containing protein at1g30440-like 0.0
C-terminus
sp_v2.0_unigene24898 SustainPine v2.0 1300
• AutoFact: O-methyltransferase n=3 Tax=Pinus RepID=O24287_PINRA 0.0
• FL-Next: tr=Caffeic acid ortho-methyltransferase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Blast2go: alkaloid o-methyltransferase related 0.0
C-terminus
sp_v2.0_unigene24948 SustainPine v2.0 910
• AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 5.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone-like protein 0.0
Complete
sp_v2.0_unigene25116 SustainPine v2.0 637
• AutoFact: DNA topoisomerase 6 subunit A [Arabidopsis thaliana] ref|XP_002870991.1| hypothetical protein ARALYDRAFT_487058 [Arabidopsis lyrata subsp. lyrata] sp|Q9LZ03.1|TOP6A_ARATH RecName: Full=DNA topoisomerase 6 subunit A; Short=AtTOP6A; AltName: Full=Meiotic re 0.0
• FL-Next: sp=DNA topoisomerase 6 subunit A; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna topoisomerase 6 subunit a-like 0.0
C-terminus
sp_v2.0_unigene25229 SustainPine v2.0 594
• AutoFact: pfam02319, E2F_TDP, E2F/DP family winged-helix DNA-binding domain 9.0e-21
• FL-Next: Isoform 2 of E2F transcription factor-like E2FE OS=Arabidopsis thaliana GN=E2FE 0.0
• Blast2go: antagonist of e2f-dp complex 0.0
Internal
sp_v2.0_unigene25320 SustainPine v2.0 1921
• AutoFact: histone H1-like protein [Zea mays] gb|ACN27409.1| unknown [Zea mays] 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: single myb histone 0.0
Complete
sp_v2.0_unigene25432 SustainPine v2.0 1311
• AutoFact: uncharacterized protein [Arabidopsis thaliana] ref|NP_974613.1| uncharacterized protein [Arabidopsis thaliana] emb|CAB36745.1| putative protein [Arabidopsis thaliana] emb|CAB79412.1| putative protein [Arabidopsis thaliana] gb|AAM62860.1| unknown [Arabidop 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein 0.0
Complete
sp_v2.0_unigene25659 SustainPine v2.0 694
• AutoFact: uncharacterized protein [Arabidopsis thaliana] ref|NP_974613.1| uncharacterized protein [Arabidopsis thaliana] emb|CAB36745.1| putative protein [Arabidopsis thaliana] emb|CAB79412.1| putative protein [Arabidopsis thaliana] gb|AAM62860.1| unknown [Arabidop 7.0e-22
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Blast2go: uncharacterized protein loc100193661 8.4402e-32
N-terminus
sp_v2.0_unigene26034 SustainPine v2.0 1348
• AutoFact: Caffeic acid O-methyltransferase (Fragment) n=1 Tax=Pinus pinaster RepID=Q9FEU5_PINPS 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: alkaloid o-methyltransferase related 0.0
Complete
sp_v2.0_unigene26107 SustainPine v2.0 1404
• AutoFact: translation initiation factor 3 subunit K [Arabidopsis thaliana] sp|Q9SZA3.1|EIF3K_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit K; Short=eIF3k; AltName: Full=eIF-3 p25 gb|AAG53637.1|AF291713_1 initiation factor 3k [Arabidopsis th 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v2.0_unigene26193 SustainPine v2.0 1435
• AutoFact: COP9 signalosome complex subunit 4 [Arabidopsis thaliana] sp|Q8L5U0.2|CSN4_ARATH RecName: Full=COP9 signalosome complex subunit 4; Short=AtS4; Short=Signalosome subunit 4; AltName: Full=Constitutive photomorphogenesis protein 8; AltName: Full=Protein FUSC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cop9 signalosome complex subunit 4 0.0
Complete
sp_v2.0_unigene27147 SustainPine v2.0 1530
• AutoFact: BTB/POZ; Superoxide dismutase, copper/zinc binding; NPH3 [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: btb poz domain-containing protein at5g66560-like 0.0
C-terminus
sp_v2.0_unigene27182 SustainPine v2.0 2386
• AutoFact: casein kinase [Beta vulgaris] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v2.0_unigene27635 SustainPine v2.0 815
• AutoFact: transcription factor (E2F) [Chenopodium rubrum] 2.0e-14
• FL-Next: Isoform 2 of Transcription factor E2FA OS=Arabidopsis thaliana GN=E2FA 0.0
• Blast2go: transcription factor e2f 4.36704e-20
C-terminus
sp_v2.0_unigene27667 SustainPine v2.0 761
• AutoFact: casein kinase [Beta vulgaris] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: casein kinase i isoform delta-like 0.0
N-terminus
sp_v2.0_unigene27697 SustainPine v2.0 2453
• AutoFact: RNA-binding protein [Arabidopsis thaliana] gb|AAK52994.1|AF375410_1 At2g43970/F6E13.10 [Arabidopsis thaliana] gb|AAK56266.1|AF367277_1 At2g43970/F6E13.10 [Arabidopsis thaliana] gb|AAK06847.1| VirF-interacting protein FIP1 [Arabidopsis thaliana] gb|AAL0708 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: lupus la 0.0
Complete
sp_v2.0_unigene27918 SustainPine v2.0 381
• AutoFact: Auxin-resistance protein 6 (Fragment) n=2 Tax=Arabidopsis thaliana RepID=A5YXU7_ARATH 4.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: auxin-resistance protein 6 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain