Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Winged helix-turn-helix transcription repressor DNA-binding

Term: IPR011991  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene20215 SustainPine v2.0 713
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: uncharacterized protein loc100193661 8.3096e-25
N-terminus
sp_v2.0_unigene20270 SustainPine v2.0 982
AutoFact: transcription factor DP1 [Populus tremula x Populus tremuloides] gb|AAP73785.1| DP1 [Populus tremula x Populus tremuloides] 8.00001e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor e2 dimerization partner protein 0.0
C-terminus
sp_v2.0_unigene20750 SustainPine v2.0 284
AutoFact: Strong similarity to the sucrose-phosphate synthase from Craterostigma plantagineum gb|Y11795 [Arabidopsis thaliana] 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sucrose-phosphate synthase 5.32664e-11
Internal
sp_v2.0_unigene20826 SustainPine v2.0 1896
AutoFact: Histone H1.1, putative n=1 Tax=Ricinus communis RepID=B9SH10_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: telomere repeat binding factor 1 0.0
Complete
sp_v2.0_unigene21223 SustainPine v2.0 702
AutoFact: casein kinase [Beta vulgaris] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: casein kinase i isoform delta-like protein 0.0
N-terminus
sp_v2.0_unigene21253 SustainPine v2.0 2165
AutoFact: Lupus la ribonucleoprotein, putative n=1 Tax=Ricinus communis RepID=B9SSZ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lupus la 0.0
Complete
sp_v2.0_unigene21780 SustainPine v2.0 2378
AutoFact: Casein kinase n=1 Tax=Beta vulgaris RepID=A2I5G0_BETVU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene21806 SustainPine v2.0 1592
AutoFact: MYB transcription factor MYB107 [Glycine max] 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: telomere repeat binding factor 1 0.0
Complete
sp_v2.0_unigene21925 SustainPine v2.0 1773
AutoFact: cullin 1C [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene22272 SustainPine v2.0 1078
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h1-like protein 0.0
Complete
sp_v2.0_unigene22669 SustainPine v2.0 799
AutoFact: HC2 multi-domain protein 9.0e-16
Coding
sp_v2.0_unigene22875 SustainPine v2.0 577
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-like protein 0.0
N-terminus
sp_v2.0_unigene23063 SustainPine v2.0 1348
AutoFact: Caffeic acid O-methyltransferase (Fragment) n=1 Tax=Pinus pinaster RepID=Q9FEU5_PINPS 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: caffeic acid o-methyltransferase 0.0
Complete
sp_v2.0_unigene23108 SustainPine v2.0 882
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h1-like protein 0.0
Complete
sp_v2.0_unigene23111 SustainPine v2.0 470
AutoFact: Caffeic acid O-methyltransferase n=1 Tax=Rosa chinensis var. spontanea RepID=Q7X9I9_ROSCH 1.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alkaloid o-methyltransferase related 3.7751e-42
C-terminus
sp_v2.0_unigene23517 SustainPine v2.0 944
AutoFact: Putative histone H1 n=1 Tax=Cryptomeria japonica RepID=Q1XG59_CRYJA 3.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-like protein 0.0
Complete
sp_v2.0_unigene23546 SustainPine v2.0 977
AutoFact: Histone H1 linker n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RTA3_PHYPA 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h1-like protein 1.629e-26
Putative Complete
sp_v2.0_unigene23760 SustainPine v2.0 1230
AutoFact: Putative histone H1 n=1 Tax=Cryptomeria japonica RepID=Q1XG59_CRYJA 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-like protein 6.59534e-40
Complete
sp_v2.0_unigene23763 SustainPine v2.0 2047
AutoFact: Heat shock transcription factor (HSF) [Glycine max] 1.4013e-45
FL-Next: sp=Heat stress transcription factor B-4d; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: heat stress transcription factor b-4-like 0.0
Complete
sp_v2.0_unigene23853 SustainPine v2.0 807
AutoFact: Histone H1-II n=2 Tax=Volvox carteri RepID=H12_VOLCA 2.0e-05
FL-Next: sp=Histone H1-II; Volvox carteri (Green alga). 0.0
Blast2go: unknown [Picea sitchensis] 3.1788e-10
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain