Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Winged helix-turn-helix transcription repressor DNA-binding

Term: IPR011991  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene85291 SustainPine v2.0 1125
AutoFact: Caffeate O-methyltransferase n=4 Tax=Picea RepID=Q5NDD5_PICAB 0.0
FL-Next: tr=Caffeate O-methyltransferase; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: caffeic acid 3-o-methyltransferase 0.0
Putative Complete
sp_v2.0_unigene85301 SustainPine v2.0 243
AutoFact: Sucrose phosphate synthase (Fragment) n=1 Tax=Musa acuminata AAA Group RepID=F2XG54_MUSAC 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sucrose-phosphate synthase 2.29638e-11
Internal
sp_v2.0_unigene85676 SustainPine v2.0 332
AutoFact: RNA polymerase sigma factor rpoD n=1 Tax=Synechocystis sp. PCC 6803 RepID=RPOD_SYNY3 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna polymerase sigma factor 0.0
Putative C-terminus
sp_v2.0_unigene85753 SustainPine v2.0 836
AutoFact: Ubiquitin-protein ligase, Cullin 4 n=2 Tax=Selaginella moellendorffii RepID=D8RM97_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-protein cullin 4 0.0
Complete
sp_v2.0_unigene86041 SustainPine v2.0 472
AutoFact: CUL1 n=9 Tax=Poaceae RepID=Q5ZC88_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene86082 SustainPine v2.0 804
AutoFact: 26S proteasome subunit RPN6a [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 26s proteasome subunit rpn6a 0.0
C-terminus
sp_v2.0_unigene86491 SustainPine v2.0 542
AutoFact: O-methyltransferase n=3 Tax=Pinus RepID=O24287_PINRA 0.0
FL-Next: tr=Caffeic acid O-methyltransferase; Pinus taeda (Loblolly pine). 0.0
Blast2go: caffeic acid o-methyltransferase 0.0
C-terminus
sp_v2.0_unigene90975 SustainPine v2.0 1158
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 1.0e-34
FL-Next: tr=Putative histone H1; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone-like protein 9.1104e-41
Complete
sp_v2.0_unigene91128 SustainPine v2.0 407
AutoFact: Caffeate O-methyltransferase n=4 Tax=Picea RepID=Q5NDD5_PICAB 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: caffeate o-methyltransferase 0.0
Putative Complete
sp_v2.0_unigene91507 SustainPine v2.0 1374
AutoFact: Caffeate O-methyltransferase n=4 Tax=Picea RepID=Q5NDD5_PICAB 0.0
FL-Next: tr=Caffeate O-methyltransferase; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: caffeic acid 3-o-methyltransferase 0.0
Complete
sp_v2.0_unigene91855 SustainPine v2.0 634
AutoFact: Caffeate O-methyltransferase n=4 Tax=Picea RepID=Q5NDD5_PICAB 0.0
FL-Next: tr=Caffeate O-methyltransferase; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: caffeate o-methyltransferase 0.0
N-terminus
sp_v2.0_unigene92323 SustainPine v2.0 437
AutoFact: transcription factor (E2F) [Chenopodium rubrum] 0.0
FL-Next: sp=Transcription factor E2FB; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription factor e2f 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain