Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: WD40 repeat, conserved site

Term: IPR019775  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene5772 SustainPine v2.0 1066
AutoFact: Lissencephaly type-1-like homology motif; CTLH, C-terminal to LisH motif; Nitrous oxide reductase, N-terminal; WD40-like; Quinonprotein alcohol dehydrogenase-like n=1 Tax=Medicago truncatula RepID=Q2HW32_MEDTR 0.0
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: topless-related protein 3 0.0
C-terminus
sp_v2.0_unigene5803 SustainPine v2.0 1160
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAR92280.1| At5g50230 [Arabidopsis thaliana] gb|AAV85684.1| At5g50230 [Arabidopsis thaliana] gb|AED95914.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein tipd-like 0.0
Putative Complete
sp_v2.0_unigene5871 SustainPine v2.0 2293
AutoFact: protein kinase-like protein [Vitis aestivalis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase family protein 0.0
Putative Complete
sp_v2.0_unigene5909 SustainPine v2.0 523
AutoFact: Prolyl oligopeptidase family protein [Arabidopsis thaliana] dbj|BAB08935.1| protease-like [Arabidopsis thaliana] gb|AED98284.1| Prolyl oligopeptidase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protease 2-like 0.0
C-terminus
sp_v2.0_unigene5935 SustainPine v2.0 2481
AutoFact: Serine/threonine-protein phosphatase (Fragment) n=5 Tax=Magnoliophyta RepID=D7T1Q5_VITVI 0.0
FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein phosphatase bsl2-like 0.0
Complete
sp_v2.0_unigene5978 SustainPine v2.0 790
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAE44475.1| WD repeat protein [Arabidopsis thaliana] gb|AEE85686.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 6.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: guanine nucleotide-binding protein subunit beta-like protein 0.0
N-terminus
sp_v2.0_unigene6111 SustainPine v2.0 925
AutoFact: putative receptor-like protein kinase INRPK1 [Oryza sativa Japonica Group] gb|EAZ10706.1| hypothetical protein OsJ_00540 [Oryza sativa Japonica Group] dbj|BAH01025.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: leucine-rich receptor-like protein kinase 0.0
Internal
sp_v2.0_unigene6128 SustainPine v2.0 1722
AutoFact: Carotenoid epsilon-ring hydroxylase n=3 Tax=Arabidopsis RepID=Q6TBX7_ARATH 0.0
FL-Next: sp=Cytochrome P450 704C1; Pinus taeda (Loblolly pine). 0.0
Blast2go: carotene epsilon- chloroplastic-like 0.0
Putative N-terminus
sp_v2.0_unigene6148 SustainPine v2.0 549
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9S0D0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat-containing protein 3-like 0.0
Internal
sp_v2.0_unigene6219 SustainPine v2.0 388
AutoFact: Cell division cycle, putative n=1 Tax=Ricinus communis RepID=B9S1Y4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cell division cycle cofactor of apc complex 0.0
Internal
sp_v2.0_unigene6307 SustainPine v2.0 1889
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Marchantia polymorpha RepID=Q84VI8_MARPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-ketoacyl- -synthase 0.0
Complete
sp_v2.0_unigene6310 SustainPine v2.0 418
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 8.24703e-21
N-terminus
sp_v2.0_unigene6336 SustainPine v2.0 1596
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SB23_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene6339 SustainPine v2.0 1201
AutoFact: U3-55K-like protein 2 [Arabidopsis thaliana] gb|AAY21208.1| U3-55K-like protein 2 [Arabidopsis thaliana] gb|AEE84406.1| U3-55K-like protein 2 [Arabidopsis thaliana] 1.0e-39
FL-Next: sp=Flowering time control protein FY; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Putative N-terminus
sp_v2.0_unigene6448 SustainPine v2.0 748
AutoFact: Beta-galactosidase (Fragment) n=1 Tax=Vitis vinifera RepID=D7SWF1_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-galactosidase 3-like 0.0
C-terminus
sp_v2.0_unigene6454 SustainPine v2.0 1135
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AED96505.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat-containing protein 25-like 0.0
N-terminus
sp_v2.0_unigene6461 SustainPine v2.0 1904
AutoFact: Coatomer alpha subunit n=1 Tax=Hordeum vulgare subsp. vulgare RepID=Q6RYF4_HORVD 0.0
FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: coatomer alpha 0.0
C-terminus
sp_v2.0_unigene6464 SustainPine v2.0 432
AutoFact: Beta-galactosidase (Fragment) n=2 Tax=Vitis vinifera RepID=D7U5K7_VITVI 3.0e-25
FL-Next: sp=Beta-galactosidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-galactosidase 1.06303e-28
N-terminus
sp_v2.0_unigene6543 SustainPine v2.0 2204
AutoFact: cellulose synthase 6 [Populus tremuloides] 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase 0.0
C-terminus
sp_v2.0_unigene6557 SustainPine v2.0 519
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at1g20230 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain