Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: WD40 repeat, conserved site

Term: IPR019775  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene77476 SustainPine v2.0 355
AutoFact: coatomer alpha subunit-like protein [Lotus japonicus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene77536 SustainPine v2.0 557
AutoFact: Beta-galactosidase n=1 Tax=Picea sitchensis RepID=A9NUR2_PICSI 0.0
FL-Next: sp=Beta-galactosidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-galactosidase 8-like isoform 1 0.0
Internal
sp_v2.0_unigene77646 SustainPine v2.0 415
AutoFact: Flap endonuclease-1, putative n=1 Tax=Ricinus communis RepID=B9RFS3_RICCO 2.0e-07
FL-Next: sp=Flap endonuclease 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: flap endonuclease- 2.84276e-08
C-terminus
sp_v2.0_unigene77685 SustainPine v2.0 466
AutoFact: cellulose synthase BoCesA4 [Bambusa oldhamii] 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase 0.0
Internal
sp_v2.0_unigene77744 SustainPine v2.0 308
AutoFact: Unassigned protein
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Blast2go: wd repeat-containing 1.21632e-29
Internal
sp_v2.0_unigene77830 SustainPine v2.0 269
AutoFact: Tetratricopeptide-like helical [Medicago truncatula] 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 1.42055e-26
Internal
sp_v2.0_unigene77880 SustainPine v2.0 415
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AEC07791.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene78168 SustainPine v2.0 373
AutoFact: Acetolactate synthase, putative n=1 Tax=Ricinus communis RepID=B9SV00_RICCO 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: act domain-containing small subunit of acetolactate synthase protein 1.26654e-34
Putative Complete
sp_v2.0_unigene78176 SustainPine v2.0 203
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transducin wd-40 repeat-containing protein 2.45615e-17
Misassembled
sp_v2.0_unigene78387 SustainPine v2.0 402
AutoFact: Pentatricopeptide repeat protein 78 (Fragment) n=1 Tax=Funaria hygrometrica RepID=F5CAE0_FUNHY 7.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene78462 SustainPine v2.0 330
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: wd repeat-containing protein 1.53686e-12
Putative C-terminus
sp_v2.0_unigene78520 SustainPine v2.0 568
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at2g15690-like 0.0
C-terminus
sp_v2.0_unigene78558 SustainPine v2.0 464
AutoFact: Eukaryotic translation initiation factor 5A 2 n=3 Tax=Picea RepID=Q3ZDK4_PICAB 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 5a1 0.0
N-terminus
sp_v2.0_unigene78584 SustainPine v2.0 487
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758 gb|AEE86306.1| pentatricopeptide repeat-containing 7.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at4g33990-like 1.10969e-20
C-terminus
sp_v2.0_unigene78695 SustainPine v2.0 436
AutoFact: Ubiquitin-activating enzyme E1 n=2 Tax=Physcomitrella patens subsp. patens RepID=A9REZ6_PHYPA 3.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-activating enzyme e1 expressed 0.0
C-terminus
sp_v2.0_unigene78720 SustainPine v2.0 469
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 6.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dyw10 protein 4.17727e-42
C-terminus
sp_v2.0_unigene78757 SustainPine v2.0 370
AutoFact: Pentatricopeptide, putative n=3 Tax=Oryza sativa RepID=Q10MA5_ORYSJ 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein mitochondrial-like 2.48619e-13
C-terminus
sp_v2.0_unigene78813 SustainPine v2.0 570
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=B8LLP6_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine hydroxymethyltransferase 0.0
Internal
sp_v2.0_unigene79122 SustainPine v2.0 337
AutoFact: LUG; LUG (LEUNIG); protein binding / protein heterodimerization/ transcription repressor 2.0e-19
FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcriptional corepressor leunig-like 9.56272e-21
Putative C-terminus
sp_v2.0_unigene79136 SustainPine v2.0 461
AutoFact: Eukaryotic initiation factor 4A-3 n=8 Tax=Embryophyta RepID=IF4A3_NICPL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic initiation factor 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain