Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: WD40 repeat, conserved site

Term: IPR019775  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene74362 SustainPine v2.0 267
• AutoFact: LRR_4 domain containing protein 2.0e-05
unknown
sp_v2.0_unigene74410 SustainPine v2.0 347
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 0.0
C-terminus
sp_v2.0_unigene74458 SustainPine v2.0 480
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FND6.1|PP411_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g40410, mitochondrial; Flags: Precursor dbj|BAB11598.1| selenium-binding protein-like [Arabidopsis thal 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v2.0_unigene74480 SustainPine v2.0 324
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V1_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 0.0
Putative C-terminus
sp_v2.0_unigene74599 SustainPine v2.0 381
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S3M3_RICCO 3.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v2.0_unigene74601 SustainPine v2.0 318
• AutoFact: Cellulose synthase catalytic subunit n=2 Tax=Pinus RepID=Q5DI93_PINTA 4.0e-29
• FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Blast2go: cellulose synthase a 2.03343e-33
Internal
sp_v2.0_unigene74652 SustainPine v2.0 349
• AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=B8LLP6_PICSI 0.0
• FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: serine hydroxymethyltransferase 1 0.0
Internal
sp_v2.0_unigene74742 SustainPine v2.0 399
• AutoFact: Tetratricopeptide-like helical n=1 Tax=Medicago truncatula RepID=Q1SN04_MEDTR 5.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.24208e-44
Internal
sp_v2.0_unigene74772 SustainPine v2.0 246
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein at4g33990-like 6.51929e-23
Internal
sp_v2.0_unigene74793 SustainPine v2.0 334
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070 gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07259.1| pentatricopeptide repe 4.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.36502e-19
C-terminus
sp_v2.0_unigene74881 SustainPine v2.0 484
• AutoFact: Pentatricopeptide (PPR) repeat-containing protein-like protein n=2 Tax=Oryza sativa Japonica Group RepID=Q6ZIP5_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 0.0
Putative C-terminus
sp_v2.0_unigene74917 SustainPine v2.0 477
• AutoFact: Endoglucanase n=2 Tax=Pinaceae RepID=A6N838_PINTA 4.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: endo- -beta-glucanase 2.16927e-28
C-terminus
sp_v2.0_unigene74984 SustainPine v2.0 396
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g18750, chloroplastic; Flags: Precursor emb|CAB37460.1| putative protein [Arabidopsis thaliana] emb|CAB 6.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 5.65171e-37
N-terminus
sp_v2.0_unigene75055 SustainPine v2.0 287
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein loc100278213 1.36602e-38
C-terminus
sp_v2.0_unigene75188 SustainPine v2.0 309
• AutoFact: Tetratricopeptide repeat, putative [Oryza sativa Japonica Group] 3.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 7.8875e-26
Internal
sp_v2.0_unigene75322 SustainPine v2.0 197
• AutoFact: OSJNBa0091C07.7 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q7XK57_ORYSJ 5.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 2.40075e-17
Internal
sp_v2.0_unigene75623 SustainPine v2.0 438
• AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 4.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 3.31718e-37
N-terminus
sp_v2.0_unigene75794 SustainPine v2.0 301
• AutoFact: WS01019.B21_H16 SS-R-N-A-11 Picea sitchensis cDNA clone WS01019_H16 3', mRNA sequence. 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 1.5612e-38
C-terminus
sp_v2.0_unigene75905 SustainPine v2.0 328
• AutoFact: glycine-rich protein 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 1.00145e-24
Internal
sp_v2.0_unigene76125 SustainPine v2.0 323
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230 gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 5.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: at1g74600-like protein 1.42357e-33
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain