Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: WD40 repeat, conserved site

Term: IPR019775  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene10269 SustainPine v2.0 837
AutoFact: U-box domain-containing protein 9 [Arabidopsis thaliana] sp|Q9SRT0.1|PUB9_ARATH RecName: Full=U-box domain-containing protein 9; AltName: Full=Plant U-box protein 9 gb|AAF02146.1|AC009853_6 hypothetical protein [Arabidopsis thaliana] gb|AAL91644.1| AT3g07 5.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 8.23859e-36
Putative N-terminus
sp_v2.0_unigene10280 SustainPine v2.0 821
AutoFact: putative protein kinase Xa21, receptor type precursor [Oryza sativa Japonica Group] 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.46629e-43
C-terminus
sp_v2.0_unigene10448 SustainPine v2.0 3947
AutoFact: E3 ubiquitin-protein ligase BRE1-like 1 [Arabidopsis thaliana] sp|Q8RXD6.1|BRE1A_ARATH RecName: Full=E3 ubiquitin-protein ligase BRE1-like 1; Short=AtBRE1; AltName: Full=Protein HISTONE MONOUBIQUITINATION 1; Short=AtHUB1 gb|AAL91211.1| unknown protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v2.0_unigene10485 SustainPine v2.0 462
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: nucleotide binding 1.87634e-42
Putative C-terminus
sp_v2.0_unigene10604 SustainPine v2.0 2093
AutoFact: Cholesterol transport protein n=1 Tax=Populus trichocarpa RepID=B9HPX9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: niemann-pick c1 0.0
C-terminus
sp_v2.0_unigene10702 SustainPine v2.0 1272
AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TRZ9_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene10742 SustainPine v2.0 571
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at4g02750-like 0.0
Internal
sp_v2.0_unigene10767 SustainPine v2.0 3625
AutoFact: putative alpha-glucanotransferase [Bacteroides fragilis NCTC 9343] emb|CAH09301.1| putative alpha-glucanotransferase [Bacteroides fragilis NCTC 9343] 0.0
FL-Next: sp=4-alpha-glucanotransferase DPE2; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: 4-alpha-glucanotransferase 0.0
Putative Complete
sp_v2.0_unigene10861 SustainPine v2.0 992
AutoFact: pfam12819, Malectin_like, Carbohydrate-binding protein of the ER 3.0e-28
FL-Next: sp=Receptor-like protein kinase THESEUS 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: receptor-like protein kinase theseus 1-like 0.0
N-terminus
sp_v2.0_unigene10873 SustainPine v2.0 469
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9RTB5_RICCO 5.0e-18
FL-Next: tr=Nucleotide binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: nucleotide binding 3.40779e-20
N-terminus
sp_v2.0_unigene10904 SustainPine v2.0 1757
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAM13156.1| unknown protein [Arabidopsis thaliana] gb|AAN15609.1| unknown protein [Arabidopsis thaliana] gb|AEE29984.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=WD repeat-containing protein DWA2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transducin family protein 0.0
Complete
sp_v2.0_unigene10967 SustainPine v2.0 3460
AutoFact: Katanin p80 WD40 repeat-containing subunit B1-1 [Arabidopsis thaliana] sp|Q8H0T9.3|KTNB1_ARATH RecName: Full=Katanin p80 WD40 repeat-containing subunit B1 homolog 1 gb|AAN72064.1| putative protein [Arabidopsis thaliana] gb|AED93166.1| Katanin p80 WD40 rep 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: katanin p80 wd40 repeat-containing subunit b1 homolog 1-like 0.0
Complete
sp_v2.0_unigene11029 SustainPine v2.0 911
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAL86343.1| unknown protein [Arabidopsis thaliana] gb|AAM91698.1| unknown protein [Arabidopsis thaliana] gb|AEE82567.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 7.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene11094 SustainPine v2.0 827
AutoFact: transducin/WD-40 repeat family protein [Olimarabidopsis pumila] 0.0
FL-Next: tr=LP6; Pinus taeda (Loblolly pine). 0.0
Blast2go: wd repeat and hmg-box dna-binding protein 1-like 0.0
N-terminus
sp_v2.0_unigene11097 SustainPine v2.0 1016
AutoFact: Heparanase, putative n=1 Tax=Ricinus communis RepID=B9T602_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heparanase-like protein 3 0.0
N-terminus
sp_v2.0_unigene11110 SustainPine v2.0 2006
AutoFact: tryptophan aminotransferase related 2 [Arabidopsis thaliana] ref|NP_974608.1| tryptophan aminotransferase related 2 [Arabidopsis thaliana] gb|AAK92714.1| putative alliin lyase [Arabidopsis thaliana] gb|AAM14394.1| putative alliin lyase [Arabidopsis thalia 0.0
FL-Next: sp=Tryptophan aminotransferase-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: alliin lyase 0.0
Complete
sp_v2.0_unigene11119 SustainPine v2.0 2871
AutoFact: putative serine/threonine protein kinase [Arabidopsis thaliana] gb|AAK25900.1|AF360190_1 putative kinase [Arabidopsis thaliana] gb|AAK64081.1| putative kinase [Arabidopsis thaliana] gb|AEE84141.1| putative serine/threonine protein kinase [Arabidopsis thal 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cyclin-dependent kinase f-4-like 0.0
Complete
sp_v2.0_unigene11129 SustainPine v2.0 811
AutoFact: Katanin p80 WD40 repeat-containing subunit B1-1 [Arabidopsis thaliana] sp|Q8H0T9.3|KTNB1_ARATH RecName: Full=Katanin p80 WD40 repeat-containing subunit B1 homolog 1 gb|AAN72064.1| putative protein [Arabidopsis thaliana] gb|AED93166.1| Katanin p80 WD40 rep 5.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: katanin p80 wd40 repeat-containing subunit b1 homolog 1-like 6.4305e-25
C-terminus
sp_v2.0_unigene11168 SustainPine v2.0 2866
AutoFact: Ser/Thr specific protein phosphatase 2A B regulatory subunit beta isoform n=3 Tax=rosids RepID=Q9FVD4_MEDSV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine protein phosphatase 2a 55 kda regulatory subunit b beta isoform-like 0.0
Complete
sp_v2.0_unigene11251 SustainPine v2.0 723
AutoFact: EST1080338 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PWACS91 3' end, mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histidine protein methyltransferase 1 homolog 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain