Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: WD40 repeat, conserved site

Term: IPR019775  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene8592 SustainPine v2.0 3748
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9T5V8_RICCO 0.0
FL-Next: tr=Nucleotide binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene8616 SustainPine v2.0 655
AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome 0.0
Internal
sp_v2.0_unigene8627 SustainPine v2.0 1189
AutoFact: zf-UBR domain containing protein 8.0e-29
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Putative N-terminus
sp_v2.0_unigene8661 SustainPine v2.0 737
AutoFact: A_TM018A10.24 gene product [Arabidopsis thaliana] emb|CAB80888.1| AT4g00790 [Arabidopsis thaliana] 8.0e-38
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: vacuolar protein sorting-associated protein 8 homolog 0.0
Internal
sp_v2.0_unigene8718 SustainPine v2.0 3042
AutoFact: 3-ketoacyl-CoA synthase n=4 Tax=rosids RepID=A9PEC4_POPTR 0.0
FL-Next: sp=3-ketoacyl-CoA synthase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: 3-ketoacyl- synthase 0.0
Complete
sp_v2.0_unigene8720 SustainPine v2.0 931
AutoFact: ATPase splayed [Arabidopsis thaliana] gb|AEC08101.1| ATPase splayed [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atpase splayed 0.0
Putative N-terminus
sp_v2.0_unigene8799 SustainPine v2.0 963
AutoFact: WS02718.B21_L19 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02718_L19 5, mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dual specificity protein phosphatase family protein 0.0
Putative N-terminus
sp_v2.0_unigene8832 SustainPine v2.0 818
AutoFact: syntaxin binding protein 5 (tomosyn) [Arabidopsis thaliana] dbj|BAB11546.1| unnamed protein product [Arabidopsis thaliana] gb|AED90890.1| syntaxin binding protein 5 (tomosyn) [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: syntaxin binding protein 5 0.0
Internal
sp_v2.0_unigene8865 SustainPine v2.0 722
AutoFact: SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TTS1_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromodomain-helicase-dna-binding protein 2-like 0.0
Putative N-terminus
sp_v2.0_unigene8964 SustainPine v2.0 1400
AutoFact: receptor protein kinase-like [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable lrr receptor-like serine threonine-protein kinase at1g06840-like 0.0
Putative C-terminus
sp_v2.0_unigene9037 SustainPine v2.0 903
AutoFact: WD40 repeat protein [Ipomoea purpurea] dbj|BAE94399.1| WD40 repeat protein [Ipomoea nil] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene9088 SustainPine v2.0 2344
AutoFact: OSJNBa0058K23.10 protein n=4 Tax=Oryza sativa RepID=Q7XTU2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 0.0
Complete
sp_v2.0_unigene9261 SustainPine v2.0 910
AutoFact: PREDICTED: similar to protein kinase family protein / WD-40 repeat family protein n=1 Tax=Vitis vinifera RepID=UPI0001984267 1.0e-37
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: phosphoinositide 3-kinase regulatory subunit 4-like 2.24684e-41
C-terminus
sp_v2.0_unigene9270 SustainPine v2.0 971
AutoFact: cysteine-rich receptor-like protein kinase 6 [Arabidopsis thaliana] sp|Q9C5S9.1|CRK6_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 6; Short=Cysteine-rich RLK6; AltName: Full=Receptor-like protein kinase 5; Flags: Precursor gb|AAK28316.1|A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cysteine-rich receptor-like protein kinase 0.0
C-terminus
sp_v2.0_unigene9297 SustainPine v2.0 1807
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAC27402.2| expressed protein [Arabidopsis thaliana] gb|AAM65204.1| unknown [Arabidopsis thaliana] dbj|BAC42145.1| unknown protein [Arabidopsis thaliana] gb|AAO63858.1| putative G-protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat-containing protein 55-like 0.0
Complete
sp_v2.0_unigene9308 SustainPine v2.0 3740
AutoFact: protein transport protein SEC31 [Arabidopsis thaliana] gb|AAM20553.1| putative protein [Arabidopsis thaliana] gb|AAP37794.1| At3g63460 [Arabidopsis thaliana] gb|AEE80486.1| protein transport protein SEC31 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein transport protein sec31 0.0
C-terminus
sp_v2.0_unigene9322 SustainPine v2.0 922
AutoFact: Heparanase, putative n=1 Tax=Ricinus communis RepID=B9T602_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heparanase-like protein 3-like 0.0
C-terminus
sp_v2.0_unigene9353 SustainPine v2.0 1556
AutoFact: kinesin family member 4/7/21/27 [Arabidopsis thaliana] gb|AED97398.1| kinesin family member 4/7/21/27 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene9356 SustainPine v2.0 1875
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SB23_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding 0.0
Complete
sp_v2.0_unigene9368 SustainPine v2.0 1935
AutoFact: UVB-resistance protein UVR8 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rcc1 and btb domain-containing protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain