Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Cystathionine beta-synthase, core

Term: IPR000644  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene27792 SustainPine v2.0 676
AutoFact: CBS and transporter associated domain-containing protein [Arabidopsis thaliana] gb|AEC06308.1| CBS and transporter associated domain-containing protein [Arabidopsis thaliana] 2.0e-37
FL-Next: sp=DUF21 domain-containing protein At2g14520; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: duf21 domain-containing protein at2g14520-like 0.0
Misassembled
sp_v2.0_unigene32501 SustainPine v2.0 724
AutoFact: sugar isomerase domain-containing protein [Arabidopsis thaliana] emb|CAB77589.1| sugar-phosphate isomerase-like protein [Arabidopsis thaliana] dbj|BAE99073.1| sugar-phosphate isomerase - like protein [Arabidopsis thaliana] gb|AEE79267.1| sugar isomerase d 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polysialic acid capsule expression protein 0.0
C-terminus
sp_v2.0_unigene33516 SustainPine v2.0 844
AutoFact: Magnesium and cobalt efflux protein corC, putative n=1 Tax=Ricinus communis RepID=B9T467_RICCO 0.0
FL-Next: sp=DUF21 domain-containing protein At1g55930, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: duf21 domain-containing protein chloroplastic-like 0.0
Internal
sp_v2.0_unigene35821 SustainPine v2.0 1133
AutoFact: CBS; Cl- channel, voltage gated; Twin-arginine translocation pathway signal [Medicago truncatula] 0.0
FL-Next: sp=Chloride channel protein CLC-c; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cl-channel clc-7 0.0
Putative N-terminus
sp_v2.0_unigene36758 SustainPine v2.0 1393
AutoFact: CBS domain-containing protein [Arabidopsis thaliana] sp|Q8GZA4.1|CBSX6_ARATH RecName: Full=CBS domain-containing protein CBSX6 dbj|BAC41791.1| unknown protein [Arabidopsis thaliana] gb|AEE34358.1| CBS domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=CBS domain-containing protein CBSX6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cbs domain-containing protein cbsx6-like 0.0
Complete
sp_v2.0_unigene41830 SustainPine v2.0 434
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q8VYD6.1|PP374_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g10690 gb|AAL59974.1| unknown protein [Arabidopsis thaliana] gb|AAM20048.1| unknown protein [Arabidopsi 5.0e-33
FL-Next: sp=Pentatricopeptide repeat-containing protein At5g10690; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 1.1911e-43
Internal
sp_v2.0_unigene43893 SustainPine v2.0 279
AutoFact: Unassigned protein
unknown
sp_v2.0_unigene46021 SustainPine v2.0 399
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bah and tfiis domain-containing protein 3.13089e-20
N-terminus
sp_v2.0_unigene50494 SustainPine v2.0 227
AutoFact: Chloride channel protein n=1 Tax=Citrus trifoliata RepID=D5LM39_PONTR 6.0e-19
FL-Next: sp=Chloride channel protein CLC-c; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chloride channel 1.46406e-22
Internal
sp_v2.0_unigene52408 SustainPine v2.0 397
AutoFact: sugar isomerase domain-containing protein [Arabidopsis thaliana] emb|CAB77589.1| sugar-phosphate isomerase-like protein [Arabidopsis thaliana] dbj|BAE99073.1| sugar-phosphate isomerase - like protein [Arabidopsis thaliana] gb|AEE79267.1| sugar isomerase d 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene54863 SustainPine v2.0 286
AutoFact: putative CLC-e chloride channel protein [Arabidopsis thaliana] 2.0e-20
FL-Next: sp=Chloride channel protein CLC-e; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chloride channel protein clc-e 2.88319e-26
Internal
sp_v2.0_unigene59414 SustainPine v2.0 831
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q8VYD6.1|PP374_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g10690 gb|AAL59974.1| unknown protein [Arabidopsis thaliana] gb|AAM20048.1| unknown protein [Arabidopsi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v2.0_unigene59990 SustainPine v2.0 838
AutoFact: DUF248 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding 0.0
Internal
sp_v2.0_unigene59998 SustainPine v2.0 615
AutoFact: CBS and transporter associated domain-containing protein [Arabidopsis thaliana] gb|AEE33322.1| CBS and transporter associated domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=DUF21 domain-containing protein At1g55930, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: magnesium and cobalt efflux protein 0.0
Internal
sp_v2.0_unigene61881 SustainPine v2.0 1142
AutoFact: CBS domain-containing protein [Arabidopsis thaliana] gb|AAL36056.1| AT4g33700/T16L1_190 [Arabidopsis thaliana] gb|AAM26645.1| AT4g33700/T16L1_190 [Arabidopsis thaliana] gb|AEE86267.1| CBS domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=DUF21 domain-containing protein At4g33700; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cbs domain-containing protein 0.0
C-terminus
sp_v2.0_unigene64701 SustainPine v2.0 403
AutoFact: chloride channel protein CLC-b [Arabidopsis thaliana] sp|P92942.1|CLCB_ARATH RecName: Full=Chloride channel protein CLC-b; Short=AtCLC-b emb|CAA96058.1| CLC-b chloride channel protein [Arabidopsis thaliana] dbj|BAB01934.1| CLC-d chloride channel; anion ch 6.0e-15
FL-Next: sp=Chloride channel protein CLC-b; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cl-channel clc-7 1.56922e-17
Internal
sp_v2.0_unigene65266 SustainPine v2.0 584
AutoFact: PREDICTED: similar to chloride channel 7 [Strongylocentrotus purpuratus] ref|XP_001179384.1| PREDICTED: similar to chloride channel 7 [Strongylocentrotus purpuratus] 5.0e-11
FL-Next: sp=Chloride channel protein CLC-d; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 7.81693e-36
Internal
sp_v2.0_unigene65549 SustainPine v2.0 352
AutoFact: CBS domain-containing protein [Arabidopsis thaliana] gb|AED96402.1| CBS domain-containing protein [Arabidopsis thaliana] 9.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cbs domain-containing protein cbsx5-like 1.05487e-23
C-terminus
sp_v2.0_unigene72985 SustainPine v2.0 286
AutoFact: putative activator subunit of SNF1-related protein kinase SNF4 [Arabidopsis thaliana] 1.0e-21
FL-Next: sp=Sucrose nonfermenting 4-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: sucrose nonfermenting 4-like 7.80808e-26
Putative C-terminus
sp_v2.0_unigene73255 SustainPine v2.0 364
AutoFact: chloride channel protein CLC-f [Arabidopsis thaliana] sp|Q8RXR2.2|CLCF_ARATH RecName: Full=Chloride channel protein CLC-f; Short=AtCLC-f gb|AAK53391.1|AF366368_1 CLC-f chloride channel protein [Arabidopsis thaliana] emb|CAC36386.1| hypothetical protein [A 4.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chloride channel protein clc-f 2.8686e-15
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain