Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, C2H2-like

Term: IPR015880  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene25226 SustainPine v2.0 772
AutoFact: putative ubiquitin-specific protease [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 15; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene25310 SustainPine v2.0 2112
AutoFact: CAF protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: endoribonuclease dicer 0.0
C-terminus
sp_v2.0_unigene25397 SustainPine v2.0 724
AutoFact: pfam03145, Sina, Seven in absentia protein family 7.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin ligase 0.0
Putative N-terminus
sp_v2.0_unigene25683 SustainPine v2.0 832
AutoFact: HD2 type histone deacetylase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RGA1_PHYPA 6.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hd2 type histone deacetylase 0.0
N-terminus
sp_v2.0_unigene25793 SustainPine v2.0 615
AutoFact: Myosin class 11-2 n=1 Tax=Adiantum capillus-veneris RepID=Q5NTX0_ADICA 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: myosin subfamily xi heavy chain 0.0
C-terminus
sp_v2.0_unigene25809 SustainPine v2.0 2288
AutoFact: DUF1644 domain containing protein 3.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Complete
sp_v2.0_unigene25824 SustainPine v2.0 291
AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9RJ95_RICCO 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid binding 0.0
Putative Complete
sp_v2.0_unigene26020 SustainPine v2.0 929
AutoFact: unconventional myosin [Helianthus annuus] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: myosin-h heavy chain-like 0.0
Internal
sp_v2.0_unigene26315 SustainPine v2.0 1311
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized zinc finger protein 0.0
N-terminus
sp_v2.0_unigene26769 SustainPine v2.0 422
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7SIH9_VITVI 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase-related protein 3.75898e-38
Internal
sp_v2.0_unigene26812 SustainPine v2.0 546
AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9RBR6_RICCO 7.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid binding 0.0
N-terminus
sp_v2.0_unigene26949 SustainPine v2.0 1366
AutoFact: TRANSPARENT TESTA 1 protein, putative n=1 Tax=Ricinus communis RepID=B9SL66_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transparent testa 1 0.0
Putative Complete
sp_v2.0_unigene27081 SustainPine v2.0 1739
AutoFact: pfam03145, Sina, Seven in absentia protein family 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin ligase 0.0
Complete
sp_v2.0_unigene27620 SustainPine v2.0 509
AutoFact: Transcriptional factor TINY, putative n=1 Tax=Ricinus communis RepID=B9RR65_RICCO 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene28018 SustainPine v2.0 1011
AutoFact: dual specificity protein phosphatase family protein [Arabidopsis thaliana] dbj|BAD18373.1| PROPYZAMIDE-HTPERSENSITIVE 1 [Arabidopsis thaliana] gb|AED93202.1| dual specificity protein phosphatase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dual specificity protein phosphatase family protein 0.0
Internal
sp_v2.0_unigene28182 SustainPine v2.0 920
AutoFact: Ubiquitin specific protease 39 and snrnp assembly factor, putative n=1 Tax=Ricinus communis RepID=B9S3J3_RICCO 0.0
FL-Next: sp=Putative ubiquitin carboxyl-terminal hydrolase 11; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene28373 SustainPine v2.0 1841
AutoFact: putative tRNA isopentenylpyrophosphatase [Ipomoea trifida] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trna isopentenyltransferase 0.0
Complete
sp_v2.0_unigene28419 SustainPine v2.0 1042
AutoFact: Endoribonuclease Dicer homolog 1 n=4 Tax=Poaceae RepID=DCL1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: endoribonuclease dicer homolog 1-like 0.0
Putative Complete
sp_v2.0_unigene28452 SustainPine v2.0 1141
AutoFact: Ubiquitin; TRAF-like [Medicago truncatula] 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin 0.0
C-terminus
sp_v2.0_unigene28517 SustainPine v2.0 917
AutoFact: Dimer_Tnp_hAT domain containing protein 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hypothetical protein VITISV_000807 [Vitis vinifera] 2.40568e-19
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain