Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, C2H2-like

Term: IPR015880  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene19552 SustainPine v2.0 425
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna binding 3.45145e-40
Internal
sp_v2.0_unigene19870 SustainPine v2.0 495
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RBQ7_RICCO 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Putative N-terminus
sp_v2.0_unigene20019 SustainPine v2.0 1062
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene21109 SustainPine v2.0 562
AutoFact: Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 [Arabidopsis thaliana] dbj|BAB09650.1| unnamed protein product [Arabidopsis thaliana] gb|AAL38717.1| unknown protein [Arabidopsis thaliana] gb|AAM51374.1| unknown protein [Arabidopsis thaliana 4.0e-29
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 2.58851e-40
Internal
sp_v2.0_unigene21331 SustainPine v2.0 339
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: hypothetical protein VITISV_016106 [Vitis vinifera] 1.64214e-16
Putative N-terminus
sp_v2.0_unigene21380 SustainPine v2.0 1676
AutoFact: DUF1644 domain containing protein 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Complete
sp_v2.0_unigene21457 SustainPine v2.0 845
AutoFact: HD2 type histone deacetylase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RGA1_PHYPA 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hd2 type histone deacetylase 0.0
N-terminus
sp_v2.0_unigene21960 SustainPine v2.0 333
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.11596e-43
C-terminus
sp_v2.0_unigene22218 SustainPine v2.0 380
AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=A9PLA4_POPTR 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 erf domain-containing transcription factor 3.0136e-40
N-terminus
sp_v2.0_unigene22395 SustainPine v2.0 1099
AutoFact: WD-40 repeat family protein [Arabidopsis thaliana] dbj|BAB09017.1| unnamed protein product [Arabidopsis thaliana] gb|AAL15328.1| AT5g67320/K8K14_4 [Arabidopsis thaliana] gb|AAN28871.1| At5g67320/K8K14_4 [Arabidopsis thaliana] gb|AED98328.1| WD-40 repeat f 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v2.0_unigene22422 SustainPine v2.0 562
AutoFact: PAT1 multi-domain protein 2.0e-15
Coding
sp_v2.0_unigene22844 SustainPine v2.0 1668
AutoFact: tropine dehydrogenase [Arabidopsis thaliana] dbj|BAA98195.1| short chain alcohol dehydrogenase-like [Arabidopsis thaliana] gb|AAO22710.1| putative short chain alcohol dehydrogenase [Arabidopsis thaliana] gb|AAO42448.1| putative short chain alcohol dehydro 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tropinone reductase homolog at1g07440 0.0
Complete
sp_v2.0_unigene22879 SustainPine v2.0 943
AutoFact: Unassigned protein
FL-Next: sp=Serrate RNA effector molecule; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: serrate rna effector molecule 1.46258e-09
C-terminus
sp_v2.0_unigene22932 SustainPine v2.0 2456
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9S558_RICCO 7.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 6.88158e-18
Putative Complete
sp_v2.0_unigene23281 SustainPine v2.0 887
AutoFact: C2H2 type zinc finger family protein n=2 Tax=Picea RepID=Q3ZDL8_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene23475 SustainPine v2.0 643
AutoFact: DUF659 domain containing protein 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100255241 6.21983e-22
Putative Complete
sp_v2.0_unigene23764 SustainPine v2.0 801
AutoFact: HD2 type histone deacetylase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RGA1_PHYPA 5.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hd2 type histone deacetylase 0.0
N-terminus
sp_v2.0_unigene24213 SustainPine v2.0 1948
AutoFact: DUF1421 multi-domain protein 9.0e-18
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: zinc finger protein 0.0
Complete
sp_v2.0_unigene25108 SustainPine v2.0 683
AutoFact: putative DEAD/H box polypeptide 36 protein [Oryza sativa Japonica Group] 1.0e-28
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent rna helicase a-like protein 1.35295e-40
Putative N-terminus
sp_v2.0_unigene25109 SustainPine v2.0 968
AutoFact: zinc finger protein 706, gene 2 [Xenopus laevis] gb|AAH74174.1| MGC81992 protein [Xenopus laevis] 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 4.62237e-38
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain