Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, C2H2-like

Term: IPR015880  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene77270 SustainPine v2.0 423
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SG74_RICCO 4.0e-24
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna rna-binding protein kin17 2.03067e-27
Internal
sp_v2.0_unigene77477 SustainPine v2.0 409
AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=A9PLA3_POPTR 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 erf domain-containing transcription factor 1.20802e-34
N-terminus
sp_v2.0_unigene77816 SustainPine v2.0 384
AutoFact: DUF659 domain containing protein 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein loc100793012 2.01032e-26
Putative C-terminus
sp_v2.0_unigene78779 SustainPine v2.0 378
AutoFact: Beta-mannosidase 2 n=3 Tax=Oncidium Gower Ramsey RepID=Q2MV11_ONCHC 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-glucosidase 44-like 0.0
Internal
sp_v2.0_unigene79383 SustainPine v2.0 436
AutoFact: Dehydration-responsive element binding protein 3 n=1 Tax=Glycine max RepID=Q2VEU3_SOYBN 3.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 erf domain-containing transcription factor 2.85072e-35
N-terminus
sp_v2.0_unigene79567 SustainPine v2.0 780
AutoFact: Dimer_Tnp_hAT domain containing protein 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100818429 6.36705e-24
C-terminus
sp_v2.0_unigene79675 SustainPine v2.0 533
AutoFact: short chain alcohol dehydrogenase-like [Arabidopsis thaliana] 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tropinone reductase homolog at1g07440-like 0.0
C-terminus
sp_v2.0_unigene79967 SustainPine v2.0 385
AutoFact: Histone deacetylase 2a, putative n=1 Tax=Ricinus communis RepID=B9SN80_RICCO 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.27929e-22
C-terminus
sp_v2.0_unigene80618 SustainPine v2.0 640
AutoFact: HD2 type histone deacetylase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RGA1_PHYPA 7.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 0.0
N-terminus
sp_v2.0_unigene80896 SustainPine v2.0 443
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_13.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7U772_VITVI 2.0e-14
FL-Next: Isoform 2 of Polycomb group protein EMBRYONIC FLOWER 2 OS=Arabidopsis thaliana GN=EMF2 0.0
Blast2go: embryonic flower 2 2.83447e-16
N-terminus
sp_v2.0_unigene80897 SustainPine v2.0 993
AutoFact: 50S ribosomal protein L11, chloroplastic n=1 Tax=Spinacia oleracea RepID=RK11_SPIOL 5.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 3.49484e-31
Complete
sp_v2.0_unigene81447 SustainPine v2.0 831
AutoFact: Monothiol glutaredoxin-S15, mitochondrial n=3 Tax=Arabidopsis RepID=GRS15_ARATH 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: monothiol glutaredoxin-s15 0.0
Putative Complete
sp_v2.0_unigene82737 SustainPine v2.0 959
AutoFact: GSK3/shaggy-like protein kinase n=1 Tax=Selaginella moellendorffii RepID=D8SX29_SELML 5.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 3.57331e-43
Putative C-terminus
sp_v2.0_unigene84344 SustainPine v2.0 238
AutoFact: putative SET domain protein SDG117 [Oryza sativa Japonica Group] 3.0e-14
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: set domain protein 1.17458e-13
C-terminus
sp_v2.0_unigene84471 SustainPine v2.0 586
AutoFact: Zinc finger protein n=3 Tax=Andropogoneae RepID=B6STE4_MAIZE 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger family expressed 0.0
C-terminus
sp_v2.0_unigene85029 SustainPine v2.0 595
AutoFact: WD-40 repeat family protein [Arabidopsis thaliana] dbj|BAB09017.1| unnamed protein product [Arabidopsis thaliana] gb|AAL15328.1| AT5g67320/K8K14_4 [Arabidopsis thaliana] gb|AAN28871.1| At5g67320/K8K14_4 [Arabidopsis thaliana] gb|AED98328.1| WD-40 repeat f 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd-40 repeat family protein 0.0
Internal
sp_v2.0_unigene85287 SustainPine v2.0 632
AutoFact: pfam03145, Sina, Seven in absentia protein family 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin ligase 0.0
N-terminus
sp_v2.0_unigene85714 SustainPine v2.0 431
AutoFact: histone-lysine N-methyltransferase SUV39H1-A [Danio rerio] gb|AAH76417.1| Suppressor of variegation 3-9 homolog 1a [Danio rerio] 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-lysine n-methyltransferase suv39h1 2.06791e-26
Internal
sp_v2.0_unigene85999 SustainPine v2.0 1133
AutoFact: zinc ion binding 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
N-terminus
sp_v2.0_unigene86080 SustainPine v2.0 387
AutoFact: C3HC4-type RING finger-containing protein n=3 Tax=Arabidopsis thaliana RepID=F4IU12_ARATH 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: c3hc4-type ring finger protein 1.01375e-37
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain