Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, C2H2-like

Term: IPR015880  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene65343 SustainPine v2.0 649
AutoFact: WS00716.B21_A07 WS-PS-N-A-8 Picea glauca cDNA clone WS00716_A07 3', mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: c2h2 zinc finger protein 0.0
Putative C-terminus
sp_v2.0_unigene65608 SustainPine v2.0 507
AutoFact: Pentatricopeptide repeat protein 71 n=1 Tax=Funaria hygrometrica RepID=F5CAD9_FUNHY 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chloroplast biogenesis 19 1.4013e-45
Internal
sp_v2.0_unigene66064 SustainPine v2.0 483
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100258643 1.33461e-27
C-terminus
sp_v2.0_unigene66603 SustainPine v2.0 269
AutoFact: putative DEAD/H box polypeptide 36 protein [Oryza sativa Japonica Group] 1.0e-37
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent rna helicase a-like protein 9.80909e-45
Internal
sp_v2.0_unigene67941 SustainPine v2.0 291
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v2.0_unigene68126 SustainPine v2.0 374
AutoFact: ubiquitin thiolesterase/ zinc ion binding 1.0e-37
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase-related protein 0.0
Internal
sp_v2.0_unigene68384 SustainPine v2.0 264
AutoFact: Aprataxin, putative n=1 Tax=Ricinus communis RepID=B9SWY0_RICCO 2.0e-29
FL-Next: sp=Transcription factor bHLH140; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription factor bhlh140-like 2.7726e-40
Internal
sp_v2.0_unigene68743 SustainPine v2.0 513
AutoFact: LIM2 transcription factor (Fragment) n=2 Tax=Pinaceae RepID=B1PPT4_PINPS 7.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gata type zinc finger transcription factor-like protein 0.0
Putative Complete
sp_v2.0_unigene68779 SustainPine v2.0 457
AutoFact: DNA/RNA-binding protein KIN17 [Bos taurus] gb|AAI46083.1| KIN protein [Bos taurus] gb|DAA23636.1| HsKin17 protein [Bos taurus] 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene69414 SustainPine v2.0 392
AutoFact: DUF547 domain containing protein 5.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100266128 1.75167e-35
Putative N-terminus
sp_v2.0_unigene69479 SustainPine v2.0 314
AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Oryza sativa Japonica Group RepID=Q5SMN5_ORYSJ 4.0e-23
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 23; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 23-like 6.41254e-27
Internal
sp_v2.0_unigene69845 SustainPine v2.0 533
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100250572 9.56375e-20
C-terminus
sp_v2.0_unigene70135 SustainPine v2.0 390
AutoFact: Lim domain protein n=2 Tax=Pinaceae RepID=F4MKL9_PINPS 2.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lim domain-containing protein 0.0
Putative N-terminus
sp_v2.0_unigene71402 SustainPine v2.0 299
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9S4Y0_RICCO 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna binding 2.74428e-16
C-terminus
sp_v2.0_unigene71624 SustainPine v2.0 289
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transparent testa 1 2.41304e-40
Internal
sp_v2.0_unigene72288 SustainPine v2.0 264
AutoFact: Pathogenesis-related homeodomain protein [Arabidopsis thaliana] sp|P48785.1|PRH_ARATH RecName: Full=Pathogenesis-related homeodomain protein; Short=PRHA gb|AAA32843.1| homeodomain protein [Arabidopsis thaliana] gb|AAC49836.1| PRHA [Arabidopsis thaliana] e 3.0e-30
FL-Next: sp=Pathogenesis-related homeodomain protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pathogenesis-related homeodomain protein 1.6812e-39
Internal
sp_v2.0_unigene72592 SustainPine v2.0 255
AutoFact: Unassigned protein
FL-Next: sp=Zinc finger protein ZAT2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: epf-type cis2-his2 zinc finger transcription factor 6.48619e-16
Internal
sp_v2.0_unigene76062 SustainPine v2.0 385
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v2.0_unigene76884 SustainPine v2.0 628
AutoFact: DUF659 domain containing protein 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100258643 3.83162e-35
Complete
sp_v2.0_unigene77131 SustainPine v2.0 357
AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=A9PLA3_POPTR 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 erf domain-containing transcription factor 4.70836e-42
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain