Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, C2H2-like

Term: IPR015880  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene28533 SustainPine v2.0 1114
AutoFact: Abscisic acid receptor PYL4 n=2 Tax=Arabidopsis RepID=PYL4_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abscisic acid receptor pyl4 0.0
Complete
sp_v2.0_unigene28633 SustainPine v2.0 1076
AutoFact: Dimer_Tnp_hAT domain containing protein 8.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.02347e-36
Putative C-terminus
sp_v2.0_unigene29129 SustainPine v2.0 834
AutoFact: zinc finger protein 4 [Arabidopsis thaliana] sp|Q39263.2|ZFP4_ARATH RecName: Full=Zinc finger protein 4 gb|AAG51296.1|AC026480_3 C2H2-type zinc finger protein, putative [Arabidopsis thaliana] gb|AAK32798.1|AF361630_1 At1g66140/F15E12_19 [Arabidopsis thali 7.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 8.55062e-24
Putative N-terminus
sp_v2.0_unigene29214 SustainPine v2.0 1334
AutoFact: C2H2-type zinc finger protein [Arabidopsis thaliana] gb|AAL55722.1|AF254447_1 WIP2 protein [Arabidopsis thaliana] emb|CAB41188.1| zinc finger-like protein [Arabidopsis thaliana] gb|AAX12859.1| At3g57670 [Arabidopsis thaliana] gb|AEE79685.1| C2H2-type zinc 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transparent testa 1 0.0
Complete
sp_v2.0_unigene29317 SustainPine v2.0 715
AutoFact: ATP-dependant RNA helicase [Plasmodium vivax SaI-1] gb|EDL44982.1| ATP-dependant RNA helicase, putative [Plasmodium vivax] 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent rna helicase dhx8 0.0
N-terminus
sp_v2.0_unigene29360 SustainPine v2.0 511
AutoFact: e-cadherin binding protein-like protein [Arabidopsis thaliana] emb|CAB69844.1| putative protein [Arabidopsis thaliana] gb|ABD59082.1| At5g01160 [Arabidopsis thaliana] dbj|BAE99278.1| hypothetical protein [Arabidopsis thaliana] gb|AED90305.1| e-cadherin bi 6.0e-33
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: protein 1.71659e-42
N-terminus
sp_v2.0_unigene29684 SustainPine v2.0 577
AutoFact: putative SET-domain transcriptional regulator [Oryza sativa Japonica Group] 4.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-lysine n-methyltransferase suvr5-like 2.22806e-43
C-terminus
sp_v2.0_unigene29713 SustainPine v2.0 786
AutoFact: WD-40 repeat family protein [Arabidopsis thaliana] dbj|BAB09017.1| unnamed protein product [Arabidopsis thaliana] gb|AAL15328.1| AT5g67320/K8K14_4 [Arabidopsis thaliana] gb|AAN28871.1| At5g67320/K8K14_4 [Arabidopsis thaliana] gb|AED98328.1| WD-40 repeat f 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
sp_v2.0_unigene29835 SustainPine v2.0 1913
AutoFact: pfam03145, Sina, Seven in absentia protein family 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin ligase 0.0
Complete
sp_v2.0_unigene30687 SustainPine v2.0 742
AutoFact: Histone-lysine n-methyltransferase, suvh, putative n=1 Tax=Ricinus communis RepID=B9SZ00_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-lysine n- h3 lysine-9 specific suvh6 0.0
C-terminus
sp_v2.0_unigene31107 SustainPine v2.0 455
AutoFact: DUF659 domain containing protein 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: hypothetical protein VITISV_016801 [Vitis vinifera] 6.85873e-30
Internal
sp_v2.0_unigene31315 SustainPine v2.0 573
AutoFact: putative zinc-finger protein [Oryza sativa Japonica Group] 7.0e-31
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: zinc-finger protein 2.14076e-40
N-terminus
sp_v2.0_unigene31377 SustainPine v2.0 793
AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=A9PLA3_POPTR 7.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 erf domain-containing transcription factor 0.0
Putative Complete
sp_v2.0_unigene31389 SustainPine v2.0 407
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative C-terminus
sp_v2.0_unigene31717 SustainPine v2.0 382
AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hypothetical protein MTR_5g012510 [Medicago truncatula] 2.2138e-19
Internal
sp_v2.0_unigene32055 SustainPine v2.0 484
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_13.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7U772_VITVI 2.0e-13
FL-Next: Isoform 2 of Polycomb group protein EMBRYONIC FLOWER 2 OS=Arabidopsis thaliana GN=EMF2 0.0
Blast2go: embryonic flower 2 7.05435e-15
N-terminus
sp_v2.0_unigene32191 SustainPine v2.0 527
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: hypothetical protein VITISV_037171 [Vitis vinifera] 6.09038e-40
Internal
sp_v2.0_unigene32650 SustainPine v2.0 346
AutoFact: DUF659 domain containing protein 6.0e-08
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: hypothetical protein VITISV_022623 [Vitis vinifera] 2.06701e-21
Internal
sp_v2.0_unigene32909 SustainPine v2.0 446
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene33030 SustainPine v2.0 580
AutoFact: putative zinc-finger protein [Oryza sativa Japonica Group] 3.0e-14
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: zinc-finger protein 3.52208e-22
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain