Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Reverse transcriptase, RNA-dependent DNA polymerase

Term: IPR013103  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene20133 SustainPine v2.0 2322
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: uncharacterized protein 0.0
Internal
sp_v2.0_unigene20169 SustainPine v2.0 435
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: gag-pol polyprotein 0.0
Internal
sp_v2.0_unigene20207 SustainPine v2.0 313
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06298_PINCU 5.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 1.18711e-39
Internal
sp_v2.0_unigene20244 SustainPine v2.0 1277
• AutoFact: Alcohol dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9SUZ6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nadp-dependent alkenal double bond reductase p2 0.0
Complete
sp_v2.0_unigene20382 SustainPine v2.0 337
• AutoFact: Pyridoxal phosphate-dependent transferase domain-containing protein [Arabidopsis thaliana] gb|AAG12531.1|AC015446_12 Similar to Allinase [Arabidopsis thaliana] gb|AEE31667.1| Pyridoxal phosphate-dependent transferase domain-containing protein [Arabidopsis 1.0e-12
• FL-Next: sp=Tryptophan aminotransferase-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: tryptophan aminotransferase-related protein 4-like 1.63407e-19
Internal
sp_v2.0_unigene20669 SustainPine v2.0 3477
• AutoFact: Protein SEY1, putative n=1 Tax=Ricinus communis RepID=B9SN36_RICCO 0.0
• FL-Next: sp=Protein ROOT HAIR DEFECTIVE 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein root hair defective 3 homolog 1-like 0.0
Complete
sp_v2.0_unigene20678 SustainPine v2.0 394
• AutoFact: Putative copia protein n=1 Tax=Oryza sativa Japonica Group RepID=Q84T44_ORYSJ 9.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type pol polyprotein 5.32162e-27
C-terminus
sp_v2.0_unigene20715 SustainPine v2.0 333
• AutoFact: Copia-like retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9FG84_ARATH 9.0e-21
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
• Blast2go: retrotransposon unclassified 4.35094e-24
Putative C-terminus
sp_v2.0_unigene20737 SustainPine v2.0 474
• AutoFact: Os04g0176900 protein n=3 Tax=Oryza sativa Japonica Group RepID=C7J1K9_ORYSJ 4.99997e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable receptor-like protein kinase at1g67000-like 7.73236e-42
Internal
sp_v2.0_unigene20758 SustainPine v2.0 1130
• AutoFact: Cinnamoyl-CoA reductase, putative n=1 Tax=Ricinus communis RepID=B9SKV5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cinnamoyl- reductase 0.0
Complete
sp_v2.0_unigene20777 SustainPine v2.0 897
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon unclassified 0.0
C-terminus
sp_v2.0_unigene20890 SustainPine v2.0 773
• AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Blast2go: laccase 12 0.0
C-terminus
sp_v2.0_unigene21123 SustainPine v2.0 2218
• AutoFact: Oxidoreductase, putative n=1 Tax=Ricinus communis RepID=B9SFV3_RICCO 0.0
• FL-Next: sp=Uncharacterized PKHD-type hydroxylase At1g22950; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: uncharacterized pkhd-type hydroxylase at1g22950-like 0.0
Complete
sp_v2.0_unigene21147 SustainPine v2.0 484
• AutoFact: Putative prolyl 4-hydroxylase, alpha subunit n=1 Tax=Cryptomeria japonica RepID=Q1XG55_CRYJA 4.0e-35
• FL-Next: tr=Putative prolyl 4-hydroxylase, alpha subunit; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Blast2go: prolyl 4-hydroxylase alpha-2 subunit 1.00193e-42
C-terminus
sp_v2.0_unigene21281 SustainPine v2.0 481
• AutoFact: cytochrome P450 [Panax ginseng] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cytochrome p450 0.0
Putative C-terminus
sp_v2.0_unigene21331 SustainPine v2.0 339
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: hypothetical protein VITISV_016106 [Vitis vinifera] 1.64214e-16
Putative N-terminus
sp_v2.0_unigene21383 SustainPine v2.0 758
• AutoFact: Transcription factor (Fragment) n=1 Tax=Lycoris longituba RepID=D6MK24_9ASPA 8.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor bhlh121-like 6.02558e-44
Putative N-terminus
sp_v2.0_unigene21419 SustainPine v2.0 219
• AutoFact: Integrase n=1 Tax=Boechera divaricarpa RepID=B6REL8_9BRAS 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 3.63931e-15
Internal
sp_v2.0_unigene21686 SustainPine v2.0 960
• AutoFact: Quinone oxidoreductase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q8LDI4_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 2-alkenal reductase 0.0
C-terminus
sp_v2.0_unigene21817 SustainPine v2.0 520
• AutoFact: Unassigned protein
• FL-Next: tr=Disease resistance protein; pekinensis). 0.0
• Blast2go: disease resistance protein 7.31522e-29
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain