Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, C2H2

Term: IPR007087  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene67 SustainPine v2.0 1695
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger protein magpie-like 1.88539e-28
C-terminus
sp_v2.0_unigene238 SustainPine v2.0 1850
AutoFact: Cleavage and polyadenylation specificity factor (CPSF) A subunit protein [Arabidopsis thaliana] gb|AAP04148.1| unknown protein [Arabidopsis thaliana] dbj|BAF01468.1| hypothetical protein [Arabidopsis thaliana] gb|AEE75129.1| Cleavage and polyadenylation s 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: cleavage and polyadenylation specificity factor a subunit protein 0.0
C-terminus
sp_v2.0_unigene264 SustainPine v2.0 2302
AutoFact: Potassium transporter, putative n=1 Tax=Ricinus communis RepID=B9T7V7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium transporter 0.0
Putative Complete
sp_v2.0_unigene281 SustainPine v2.0 2479
AutoFact: Protein arginine n-methyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RGH9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein arginine n-methyltransferase 6 0.0
Putative Complete
sp_v2.0_unigene484 SustainPine v2.0 2709
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9R6Q1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding 0.0
C-terminus
sp_v2.0_unigene601 SustainPine v2.0 1460
AutoFact: putative ubiquitin-specific protease [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 16; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 16-like 0.0
C-terminus
sp_v2.0_unigene694 SustainPine v2.0 3014
AutoFact: potassium transporter 1 [Arabidopsis thaliana] sp|O22397.2|POT1_ARATH RecName: Full=Potassium transporter 1; Short=AtKT1; Short=AtKUP1; Short=AtPOT1 gb|AAB87687.1| potassium transporter [Arabidopsis thaliana] gb|AAB88901.1| high-affinity potassium transpo 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium transporter 0.0
Complete
sp_v2.0_unigene776 SustainPine v2.0 1380
AutoFact: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 n=2 Tax=Arabidopsis RepID=SD25_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: g-type lectin s-receptor-like serine threonine-protein kinase sd2-5-like 0.0
C-terminus
sp_v2.0_unigene953 SustainPine v2.0 1419
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
C-terminus
sp_v2.0_unigene1065 SustainPine v2.0 967
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_156.assembly12x (Fragment) n=3 Tax=Vitis vinifera RepID=D7TNX1_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: hit-type zinc finger family protein 0.0
N-terminus
sp_v2.0_unigene1109 SustainPine v2.0 1354
AutoFact: zinc finger-related protein [Arabidopsis thaliana] dbj|BAB09342.1| unnamed protein product [Arabidopsis thaliana] gb|AAK73988.1| AT5g54630/MRB17_13 [Arabidopsis thaliana] gb|AAM70576.1| AT5g54630/MRB17_13 [Arabidopsis thaliana] gb|AED96520.1| zinc finger- 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: c2h2 zinc finger protein 0.0
C-terminus
sp_v2.0_unigene1137 SustainPine v2.0 1029
AutoFact: pfam02463, SMC_N, RecF/RecN/SMC N terminal domain 0.0
FL-Next: sp=Structural maintenance of chromosomes protein 2-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: structural maintenance of chromosomes protein 3-like 0.0
N-terminus
sp_v2.0_unigene1146 SustainPine v2.0 1346
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9R8B0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 0.0
Putative C-terminus
sp_v2.0_unigene1152 SustainPine v2.0 1340
AutoFact: ethanol induced 1 isoform 1 [Mus musculus] emb|CAM28029.1| ethanol induced 1 [Mus musculus] 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene1251 SustainPine v2.0 1838
AutoFact: Shwachman-Bodian-Diamond syndrome protein, putative n=1 Tax=Ricinus communis RepID=B9S2M8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene1265 SustainPine v2.0 914
AutoFact: Abscisic acid receptor PYR1 n=1 Tax=Fragaria x ananassa RepID=F2YHU9_FRAAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abscisic acid receptor pyr1 0.0
Complete
sp_v2.0_unigene1316 SustainPine v2.0 3116
AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9SIX2_RICCO 0.0
FL-Next: sp=Auxin transport protein BIG; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: e3 ubiquitin-protein ligase ubr4 0.0
C-terminus
sp_v2.0_unigene1466 SustainPine v2.0 1172
AutoFact: CAF protein n=17 Tax=Camelineae RepID=Q56Y50_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: endoribonuclease dicer 0.0
Complete
sp_v2.0_unigene1533 SustainPine v2.0 1732
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9T0P5_RICCO 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 0.0
Complete
sp_v2.0_unigene1600 SustainPine v2.0 2573
AutoFact: putative potasium transporter [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium transporter 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain