Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, C2H2

Term: IPR007087  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene11331 SustainPine v2.0 2146
AutoFact: Set domain protein, putative n=1 Tax=Ricinus communis RepID=B9S8S4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-lysine n-methyltransferase suvr5-like 0.0
Complete
sp_v2.0_unigene11358 SustainPine v2.0 1966
AutoFact: CDC48-interacting UBX-domain protein n=3 Tax=Arabidopsis RepID=Q9ZU93_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ubx domain-containing protein 6-like 0.0
Putative Complete
sp_v2.0_unigene11578 SustainPine v2.0 3445
AutoFact: FPL domain containing protein 7.0e-26
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene11593 SustainPine v2.0 1534
AutoFact: protein kinase-like protein [Arabidopsis thaliana] gb|AEE30469.1| protein kinase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: serine threonine-protein kinase pbs1-like 0.0
Complete
sp_v2.0_unigene11598 SustainPine v2.0 859
AutoFact: Transcription factor (Fragment) n=1 Tax=Lycoris longituba RepID=D6MK34_9ASPA 9.0e-26
FL-Next: tr=Transcription factor AP2; Taxus cuspidata (Japanese yew). 0.0
Blast2go: ap2 erf domain-containing transcription factor 1.67556e-31
C-terminus
sp_v2.0_unigene11679 SustainPine v2.0 1513
AutoFact: Glutamate receptor (Fragment) n=2 Tax=Vitis vinifera RepID=D7SWB7_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glutamate-gated kainate-type ion channel receptor subunit 5 0.0
Putative Complete
sp_v2.0_unigene11828 SustainPine v2.0 1653
AutoFact: DNA-directed RNA polymerase (Fragment) n=10 Tax=Spermatophyta RepID=Q2TUN6_GINBI 0.0
FL-Next: sp=DNA-directed RNA polymerase; Pinus koraiensis (Korean pine). Plastid; Chloroplast. 0.0
Blast2go: rna polymerase ii largest subunit 0.0
Putative C-terminus
sp_v2.0_unigene11924 SustainPine v2.0 666
AutoFact: C3HC4-type RING finger-containing protein [Arabidopsis thaliana] gb|AEC09620.1| C3HC4-type RING finger-containing protein [Arabidopsis thaliana] 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding 0.0
Internal
sp_v2.0_unigene11940 SustainPine v2.0 2312
AutoFact: DUF3406 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v2.0_unigene11961 SustainPine v2.0 742
AutoFact: aluminum activated malate transporter family protein [Arabidopsis thaliana] sp|O23086.2|ALMTA_ARATH RecName: Full=Aluminum-activated malate transporter 10; Short=AtALMT10 gb|AEE81955.1| aluminum activated malate transporter family protein [Arabidopsis tha 0.0
FL-Next: sp=Aluminum-activated malate transporter 10; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene12028 SustainPine v2.0 558
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger protein 0.0
N-terminus
sp_v2.0_unigene12033 SustainPine v2.0 677
AutoFact: Cleavage and polyadenylation specificity factor (CPSF) A subunit protein [Arabidopsis thaliana] gb|AAP04148.1| unknown protein [Arabidopsis thaliana] dbj|BAF01468.1| hypothetical protein [Arabidopsis thaliana] gb|AEE75129.1| Cleavage and polyadenylation s 0.0
FL-Next: sp=DNA damage-binding protein 1; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: dna damage-binding partial 0.0
Internal
sp_v2.0_unigene12168 SustainPine v2.0 707
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_54.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7SRS4_VITVI 0.0
FL-Next: Isoform 2 of Histone acetyltransferase HAC1 OS=Arabidopsis thaliana GN=HAC1 0.0
Blast2go: histone acetyltransferase 0.0
Internal
sp_v2.0_unigene12169 SustainPine v2.0 423
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9S7A8_RICCO 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.2039e-45
Internal
sp_v2.0_unigene12203 SustainPine v2.0 2088
AutoFact: Serine/threonine-protein kinase PBS1, putative n=1 Tax=Ricinus communis RepID=B9S327_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein kinase 0.0
Putative Complete
sp_v2.0_unigene12286 SustainPine v2.0 379
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9S355_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent rna 0.0
Internal
sp_v2.0_unigene12344 SustainPine v2.0 866
AutoFact: DEA(D/H)-box RNA helicase family protein n=5 Tax=Arabidopsis RepID=F4IM84_ARATH 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable atp-dependent rna helicase dhx36-like 0.0
Internal
sp_v2.0_unigene12489 SustainPine v2.0 1166
AutoFact: zinc finger protein 6 [Arabidopsis thaliana] sp|Q39265.1|ZFP6_ARATH RecName: Full=Zinc finger protein 6 gb|AAF98212.1|AC007152_8 zinc finger protein zep6 [Arabidopsis thaliana] gb|AAA87302.1| zinc finger protein [Arabidopsis thaliana] gb|AAK91404.1| At1g6 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger protein 4.09356e-10
N-terminus
sp_v2.0_unigene12500 SustainPine v2.0 980
AutoFact: cytokinin-regulated kinase 1 [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v2.0_unigene12550 SustainPine v2.0 1235
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7SIH9_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase-related protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain