Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, C2H2

Term: IPR007087  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene42304 SustainPine v2.0 775
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] emb|CAC01781.1| putative protein [Arabidopsis thaliana] gb|AAL15297.1| AT5g15820/F14F8_200 [Arabidopsis thaliana] gb|AAM47324.1| AT5g15820/F14F8_200 [Arabidopsis thaliana] gb|AED92211.1| RING/U-b 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring u-box domain-containing protein 3.98227e-23
Internal
sp_v2.0_unigene42312 SustainPine v2.0 246
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SVA9_RICCO 8.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: c3hc4-type ring finger protein 8.51752e-24
Internal
sp_v2.0_unigene42437 SustainPine v2.0 574
• AutoFact: JmjC domain containing protein 7.0e-15
• FL-Next: sp=Probable lysine-specific demethylase ELF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: lysine-specific demethylase ref6-like 0.0
Internal
sp_v2.0_unigene42687 SustainPine v2.0 412
• AutoFact: Set domain protein, putative n=1 Tax=Ricinus communis RepID=B9S8S4_RICCO 3.9937e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone-lysine n-methyltransferase suvr5-like 9.80909e-44
Internal
sp_v2.0_unigene42695 SustainPine v2.0 697
• AutoFact: DUF659 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna binding 0.0
Putative Complete
sp_v2.0_unigene42891 SustainPine v2.0 147
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger protein 9.16763e-24
Internal
sp_v2.0_unigene42935 SustainPine v2.0 438
• AutoFact: PHD domain containing protein 3.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: strawberry notch-like protein 5.7229e-42
Putative N-terminus
sp_v2.0_unigene43052 SustainPine v2.0 409
• AutoFact: E012581-024-016-K22-SP6 MPIZ-ADIS-024-storage root Beta vulgaris cDNA clone 024-016-K22 5-PRIME, mRNA sequence. 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 5.97554e-28
Internal
sp_v2.0_unigene43077 SustainPine v2.0 482
• AutoFact: DUF659 domain containing protein 5.04467e-44
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: hypothetical protein VITISV_041109 [Vitis vinifera] 7.92868e-27
Internal
sp_v2.0_unigene43278 SustainPine v2.0 525
• AutoFact: putative zinc-finger protein [Oryza sativa Japonica Group] 1.0e-32
• FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
• Blast2go: zinc-finger protein 3.21905e-40
N-terminus
sp_v2.0_unigene43411 SustainPine v2.0 449
• AutoFact: dicer-like protein 4 [Arabidopsis thaliana] sp|P84634.2|DCL4_ARATH RecName: Full=Dicer-like protein 4 gb|AAZ80387.1| dicer-like 4 [Arabidopsis thaliana] gb|AED92830.1| dicer-like protein 4 [Arabidopsis thaliana] 1.0e-23
• FL-Next: sp=Endoribonuclease Dicer homolog 3a; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: dicer-like protein 4 2.33489e-34
Internal
sp_v2.0_unigene43546 SustainPine v2.0 744
• AutoFact: Unassigned protein
• FL-Next: sp=Auxin transport protein BIG; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: e3 ubiquitin-protein ligase ubr4 0.0
Internal
sp_v2.0_unigene43814 SustainPine v2.0 403
• AutoFact: DUF659 domain containing protein 1.0e-05
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: dna binding 3.03744e-23
Internal
sp_v2.0_unigene43841 SustainPine v2.0 784
• AutoFact: DUF659 domain containing protein 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: dna binding 0.0
Internal
sp_v2.0_unigene43978 SustainPine v2.0 351
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SH81_RICCO 1.0e-39
• FL-Next: sp=Methyl-CpG-binding domain-containing protein 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna binding 0.0
Internal
sp_v2.0_unigene44079 SustainPine v2.0 473
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_191.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7TRM5_VITVI 3.00004e-41
• FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: at4g01020-like protein 0.0
Internal
sp_v2.0_unigene44646 SustainPine v2.0 391
• AutoFact: Ubiquitin carboxyl-terminal hydrolase (Fragment) n=3 Tax=Vitis vinifera RepID=E0CRZ8_VITVI 1.0e-32
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 23; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: ubiquitin carboxyl-terminal hydrolase 23-like 4.55743e-35
Internal
sp_v2.0_unigene44770 SustainPine v2.0 491
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9T7C4_RICCO 6.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein binding 0.0
Internal
sp_v2.0_unigene44826 SustainPine v2.0 490
• AutoFact: myosin [Arabidopsis thaliana] 0.0
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: protein 0.0
Internal
sp_v2.0_unigene44956 SustainPine v2.0 414
• AutoFact: DUF659 domain containing protein 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: hypothetical protein VITISV_006607 [Vitis vinifera] 4.42297e-37
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain