Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, C2H2

Term: IPR007087  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene26123 SustainPine v2.0 1947
AutoFact: E3 ubiquitin-protein ligase PRT1 [Arabidopsis thaliana] sp|Q8LBL5.2|PRT1_ARATH RecName: Full=E3 ubiquitin-protein ligase PRT1; AltName: Full=Proteolysis 1 protein emb|CAA11891.1| PRT1 [Arabidopsis thaliana] emb|CAA11892.1| PRT1 [Arabidopsis thaliana] dbj| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase prt1 0.0
Complete
sp_v2.0_unigene26144 SustainPine v2.0 1363
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene26315 SustainPine v2.0 1311
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized zinc finger protein 0.0
N-terminus
sp_v2.0_unigene26646 SustainPine v2.0 2622
AutoFact: high-affinity K+ transporter [Capsicum annuum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene26769 SustainPine v2.0 422
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7SIH9_VITVI 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase-related protein 3.75898e-38
Internal
sp_v2.0_unigene26812 SustainPine v2.0 546
AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9RBR6_RICCO 7.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid binding 0.0
N-terminus
sp_v2.0_unigene26949 SustainPine v2.0 1366
AutoFact: TRANSPARENT TESTA 1 protein, putative n=1 Tax=Ricinus communis RepID=B9SL66_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transparent testa 1 0.0
Putative Complete
sp_v2.0_unigene27088 SustainPine v2.0 466
AutoFact: DNA-directed RNA polymerase (Fragment) n=2 Tax=Spermatophyta RepID=Q2TUM9_9CONI 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit beta'' 2; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). Plastid; Chloroplast. 0.0
Blast2go: rna polymerase iii large subunit 0.0
Internal
sp_v2.0_unigene27146 SustainPine v2.0 1885
AutoFact: WS02926.CR_L20 SS-IB-A-FL-15 Picea sitchensis cDNA clone WS02926_L20 3', mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: strawberry notch-like protein 0.0
C-terminus
sp_v2.0_unigene27219 SustainPine v2.0 737
AutoFact: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] emb|CAB87691.1| putative protein [Arabidopsis thaliana] gb|AAM13183.1| putative protein [Arabidopsis thaliana] gb|AAP68292.1| At5g11730 [Arabidopsis thaliana 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: core-2 i-branching beta- -n-acetylglucosaminyltransferase family protein 0.0
N-terminus
sp_v2.0_unigene27476 SustainPine v2.0 1357
AutoFact: senescence-inducible chloroplast stay-green protein 1 [Solanum lycopersicum] gb|ACB56587.1| green flesh protein [Solanum lycopersicum] gb|ACV60215.1| green flesh protein [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: senescence-inducible chloroplast stay-green protein 1 0.0
Complete
sp_v2.0_unigene27620 SustainPine v2.0 509
AutoFact: Transcriptional factor TINY, putative n=1 Tax=Ricinus communis RepID=B9RR65_RICCO 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene27766 SustainPine v2.0 1136
AutoFact: Pectinesterase n=1 Tax=Ricinus communis RepID=B9RKG6_RICCO 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable pectinesterase 53-like 0.0
C-terminus
sp_v2.0_unigene27806 SustainPine v2.0 2228
AutoFact: Potassium transporter, putative n=1 Tax=Ricinus communis RepID=B9RGU8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium transporter 0.0
Complete
sp_v2.0_unigene27910 SustainPine v2.0 521
AutoFact: Transcription factor jumonji (jmjC) domain-containing protein [Arabidopsis thaliana] gb|AAL60025.1| unknown protein [Arabidopsis thaliana] gb|AAM20342.1| unknown protein [Arabidopsis thaliana] gb|AEE81964.1| Transcription factor jumonji (jmjC) domain-cont 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transcription factor jumonji domain-containing protein 0.0
Internal
sp_v2.0_unigene27946 SustainPine v2.0 670
AutoFact: DNA-directed RNA polymerase (Fragment) n=10 Tax=Spermatophyta RepID=Q2TUN6_GINBI 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit beta'' 2; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). Plastid; Chloroplast. 0.0
Blast2go: rna polymerase ii largest subunit 0.0
Internal
sp_v2.0_unigene28343 SustainPine v2.0 4665
AutoFact: DNA-directed RNA polymerase n=37 Tax=Spermatophyta RepID=C5YGY9_SORBI 0.0
FL-Next: sp=DNA-directed RNA polymerase; Pinus koraiensis (Korean pine). Plastid; Chloroplast. 0.0
Putative C-terminus
sp_v2.0_unigene28409 SustainPine v2.0 1281
AutoFact: V-type H+-transporting ATPase subunit I [Arabidopsis thaliana] gb|AAM14030.1| putative vacuolar proton-ATPase subunit [Arabidopsis thaliana] gb|AEC08134.1| V-type H+-transporting ATPase subunit I [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: vacuolar proton 0.0
N-terminus
sp_v2.0_unigene28517 SustainPine v2.0 917
AutoFact: Dimer_Tnp_hAT domain containing protein 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hypothetical protein VITISV_000807 [Vitis vinifera] 2.40568e-19
Internal
sp_v2.0_unigene28533 SustainPine v2.0 1114
AutoFact: Abscisic acid receptor PYL4 n=2 Tax=Arabidopsis RepID=PYL4_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abscisic acid receptor pyl4 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain