Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, CCHC-type

Term: IPR001878  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene11679 SustainPine v2.0 1513
AutoFact: Glutamate receptor (Fragment) n=2 Tax=Vitis vinifera RepID=D7SWB7_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glutamate-gated kainate-type ion channel receptor subunit 5 0.0
Putative Complete
sp_v2.0_unigene11738 SustainPine v2.0 895
AutoFact: Chloroplast biogenesis protein n=1 Tax=Lotus japonicus RepID=Q8GZD1_LOTJA 0.0
FL-Next: sp=Cytochrome c-type biogenesis ccda-like chloroplastic protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cytochrome c biogenesis protein precursor 0.0
C-terminus
sp_v2.0_unigene11798 SustainPine v2.0 811
AutoFact: DNA repair protein XRCC3-like protein [Arabidopsis thaliana] ref|NP_851202.1| DNA repair protein XRCC3-like protein [Arabidopsis thaliana] sp|Q9FKM5.1|XRCC3_ARATH RecName: Full=DNA repair protein XRCC3 homolog; AltName: Full=X-ray repair cross-complementi 7.0e-36
FL-Next: sp=DNA repair protein XRCC3 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair protein xrcc3-like protein 2.10195e-44
Internal
sp_v2.0_unigene11823 SustainPine v2.0 1294
AutoFact: cysteine-rich receptor-like protein kinase 29 [Arabidopsis thaliana] sp|Q8S9L6.1|CRK29_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 29; Short=Cysteine-rich RLK29; Flags: Precursor gb|AAL75897.1| AT4g21410/T6K22_140 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cysteine-rich receptor-like protein kinase 10-like 0.0
Complete
sp_v2.0_unigene11904 SustainPine v2.0 646
AutoFact: Triacylglycerol lipase n=2 Tax=Arabidopsis thaliana RepID=F4JT30_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein At4g13550; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v2.0_unigene11926 SustainPine v2.0 919
AutoFact: Histidine kinase 1 plant, putative n=1 Tax=Ricinus communis RepID=B9SUH7_RICCO 8.00001e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histidine kinase osmosensor protein 4.2039e-45
N-terminus
sp_v2.0_unigene11950 SustainPine v2.0 612
AutoFact: pfam12807, eIF3_p135, Translation initiation factor eIF3 subunit 135 6.0e-34
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein kiaa0664 homolog 0.0
Internal
sp_v2.0_unigene11966 SustainPine v2.0 367
AutoFact: zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana] dbj|BAA97014.1| unnamed protein product [Arabidopsis thaliana] gb|AED95872.1| zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana] 4.0e-17
FL-Next: tr=Putative uncharacterized protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nuclear export mediator factor nemf-like 1.05735e-21
C-terminus
sp_v2.0_unigene12198 SustainPine v2.0 509
AutoFact: PREDICTED: similar to pol polyprotein, partial n=1 Tax=Nasonia vitripennis RepID=UPI00015B4525 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lectin receptor kinase 2.79972e-26
N-terminus
sp_v2.0_unigene12199 SustainPine v2.0 548
AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 1.0e-25
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: gag-pol polyprotein 2.86223e-27
C-terminus
sp_v2.0_unigene12231 SustainPine v2.0 1105
AutoFact: MYB transcription factor MYB93 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene12254 SustainPine v2.0 659
AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
C-terminus
sp_v2.0_unigene12259 SustainPine v2.0 776
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9T2G2_RICCO 0.0
FL-Next: tr=Transcription factor, putative; Ricinus communis (Castor bean). 0.0
Blast2go: uncharacterized protein loc100816474 0.0
N-terminus
sp_v2.0_unigene12269 SustainPine v2.0 457
AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUH9_PINTA 0.0
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene12631 SustainPine v2.0 474
AutoFact: RecName: Full=Glutamate receptor 2.5; AltName: Full=Ligand-gated ion channel 2.5; Flags: Precursor 9.0e-11
FL-Next: sp=Glutamate receptor 2.5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glutamate receptor -like 1.05297e-13
Internal
sp_v2.0_unigene12871 SustainPine v2.0 493
AutoFact: Histidine kinase osmosensor protein n=1 Tax=Populus trichocarpa RepID=B9GYZ6_POPTR 2.0e-17
FL-Next: sp=Histidine kinase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histidine kinase osmosensor protein 1.71069e-19
C-terminus
sp_v2.0_unigene12873 SustainPine v2.0 1926
AutoFact: MYB transcription factor MYB93 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene12875 SustainPine v2.0 346
AutoFact: O-fucosyltransferase family protein [Arabidopsis thaliana] gb|AED97925.1| O-fucosyltransferase family protein [Arabidopsis thaliana] 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: duf246 domain-containing protein at1g04910-like 0.0
Internal
sp_v2.0_unigene13064 SustainPine v2.0 642
AutoFact: Gland-specific fatty acyl-CoA reductase 1 n=1 Tax=Artemisia annua RepID=E9KL86_ARTAN 2.94273e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene13117 SustainPine v2.0 1347
AutoFact: Xyloglucan endotransglucosylase/hydrolase protein 9, putative n=1 Tax=Ricinus communis RepID=B9S9N2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: xyloglucan endotransglucosylase hydrolase protein 9 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain