Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, CCHC-type

Term: IPR001878  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene4759 SustainPine v2.0 594
AutoFact: RNA-binding protein n=1 Tax=Nicotiana tabacum RepID=Q941H9_TOBAC 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycine-rich rna-binding 0.0
N-terminus
sp_v2.0_unigene4882 SustainPine v2.0 571
AutoFact: Glutaredoxin n=2 Tax=rosids RepID=B9GF65_POPTR 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: grx_c8 - glutaredoxin subgroup iii 0.0
Complete
sp_v2.0_unigene4915 SustainPine v2.0 1039
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: uncharacterized protein loc100261463 3.29003e-07
C-terminus
sp_v2.0_unigene4967 SustainPine v2.0 1291
AutoFact: Cinnamoyl-CoA reductase n=2 Tax=Malvoideae RepID=D9ZKR8_9ROSI 0.0
FL-Next: tr=Cinnamoyl-CoA reductase; Pinus taeda (Loblolly pine). 0.0
Blast2go: cinnamoyl reductase 0.0
Putative Complete
sp_v2.0_unigene5048 SustainPine v2.0 1455
AutoFact: Eukaryotic translation initiation factor 2c, putative n=1 Tax=Ricinus communis RepID=B9SP45_RICCO 0.0
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: argonaute-like protein 0.0
C-terminus
sp_v2.0_unigene5081 SustainPine v2.0 1134
AutoFact: zinc finger CCCH domain-containing protein 51 [Arabidopsis thaliana] ref|NP_850780.1| zinc finger CCCH domain-containing protein 51 [Arabidopsis thaliana] sp|Q9FNG6.1|C3H51_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 51; Short=AtC3H51 d 0.0
FL-Next: sp=Zinc finger CCCH domain-containing protein 15; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: zinc finger ccch domain-containing protein 51 0.0
C-terminus
sp_v2.0_unigene5379 SustainPine v2.0 1259
AutoFact: ARGONAUTE 1 n=2 Tax=Nicotiana RepID=D6RUV9_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: argonaute protein group 0.0
Complete
sp_v2.0_unigene5764 SustainPine v2.0 413
AutoFact: DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana] sp|O22907.2|RH24_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 24 gb|AAL15330.1| At2g47330/T8I13.17 [Arabidopsis thaliana] gb|AAB63833.2| putative ATP-dependent RNA helicase [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 24 0.0
Internal
sp_v2.0_unigene5974 SustainPine v2.0 5387
AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v2.0_unigene6025 SustainPine v2.0 1679
AutoFact: CCHC-type zinc knuckle protein [Arabidopsis thaliana] emb|CAB86673.1| putative protein [Arabidopsis thaliana] gb|AAL38752.1| unknown protein [Arabidopsis thaliana] gb|AAM91719.1| unknown protein [Arabidopsis thaliana] gb|AEE77756.1| CCHC-type zinc knuckle 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc knuckle (cchc-type) family protein 0.0
Complete
sp_v2.0_unigene6157 SustainPine v2.0 2628
AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 5 -3 exoribonuclease 3-like 0.0
Complete
sp_v2.0_unigene6258 SustainPine v2.0 1531
AutoFact: Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Picea sitchensis RepID=A9NNT0_PICSI 0.0
FL-Next: sp=Eukaryotic translation initiation factor 3 subunit G; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: initiation factor 3g 0.0
Complete
sp_v2.0_unigene6377 SustainPine v2.0 2214
AutoFact: Carbon catabolite repressor protein 4 homolog 5 n=2 Tax=Arabidopsis RepID=CCR4E_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: carbon catabolite repressor protein 4-like 3 0.0
Complete
sp_v2.0_unigene6437 SustainPine v2.0 440
AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: laccase 12 0.0
Internal
sp_v2.0_unigene6444 SustainPine v2.0 1869
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SE49_RICCO 0.0
FL-Next: sp=tRNA dimethylallyltransferase 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: trna dimethylallyltransferase 9 0.0
Complete
sp_v2.0_unigene6475 SustainPine v2.0 2071
AutoFact: DnaJ protein-like [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein dnaj mitochondrial-like 0.0
Putative Complete
sp_v2.0_unigene6501 SustainPine v2.0 486
AutoFact: Chaperone protein DNAj, putative n=1 Tax=Ricinus communis RepID=B9RJS6_RICCO 6.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein dnaj 9.18245e-31
Putative C-terminus
sp_v2.0_unigene6505 SustainPine v2.0 2285
AutoFact: Argonaute/Zwille-like protein n=2 Tax=Picea RepID=Q4PLA9_PICGL 0.0
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: argonaute protein group 0.0
C-terminus
sp_v2.0_unigene6518 SustainPine v2.0 572
AutoFact: Dihydroxyacetone kinase [Arabidopsis thaliana] gb|AAZ23925.1| At3g17770 [Arabidopsis thaliana] gb|AEE76005.1| Dihydroxyacetone kinase [Arabidopsis thaliana] 0.0
FL-Next: sp=Putative 3,4-dihydroxy-2-butanone kinase; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: dihydroxy-2-butanone kinase 0.0
N-terminus
sp_v2.0_unigene6665 SustainPine v2.0 845
AutoFact: Cytochrome P450 750A1 n=1 Tax=Pinus taeda RepID=C75A1_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 monooxygenase cyp736b 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain