Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Integrase, catalytic core

Term: IPR001584  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene9695 SustainPine v2.0 1337
AutoFact: BY-2 kinesin-like protein 5 [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
sp_v2.0_unigene9789 SustainPine v2.0 971
AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Putative Complete
sp_v2.0_unigene9848 SustainPine v2.0 1074
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene10054 SustainPine v2.0 1293
AutoFact: Cinnamoyl-CoA reductase, putative n=1 Tax=Ricinus communis RepID=B9S058_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cinnamoyl- reductase 0.0
Complete
sp_v2.0_unigene10170 SustainPine v2.0 2698
AutoFact: Signal recognition particle subunit srp72, putative n=1 Tax=Ricinus communis RepID=B9RMK3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: signal recognition particle subunit srp72 0.0
Complete
sp_v2.0_unigene10335 SustainPine v2.0 1021
AutoFact: rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] gb|AAB60741.1| F21M12.27 gene product [Arabidopsis thaliana] gb|AEE28510.1| rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rhamnogalacturonate lyase 0.0
Putative N-terminus
sp_v2.0_unigene10471 SustainPine v2.0 564
AutoFact: 5'-3' exoribonuclease 3 [Arabidopsis thaliana] sp|Q9FQ03.1|XRN3_ARATH RecName: Full=5'-3' exoribonuclease 3; AltName: Full=Protein EXORIBONUCLEASE 3 gb|AAG40732.1|AF286719_1 XRN3 [Arabidopsis thaliana] gb|AEE35742.1| 5'-3' exoribonuclease 3 [Arabidopsis t 0.0
FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 0.0
Blast2go: 5 -3 exoribonuclease 3-like 0.0
N-terminus
sp_v2.0_unigene10760 SustainPine v2.0 841
AutoFact: putative protein phosphatase 2C 8 [Arabidopsis thaliana] sp|Q9LMT1.2|P2C08_ARATH RecName: Full=Probable protein phosphatase 2C 8; Short=AtPP2C08 gb|ABG48379.1| At1g18030 [Arabidopsis thaliana] gb|AEE29665.1| putative protein phosphatase 2C 8 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 2c 8 0.0
Putative C-terminus
sp_v2.0_unigene10768 SustainPine v2.0 2176
AutoFact: transcription factor DP1 [Populus tremula x Populus tremuloides] gb|AAP73785.1| DP1 [Populus tremula x Populus tremuloides] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor e2 dimerization partner protein 0.0
Complete
sp_v2.0_unigene10847 SustainPine v2.0 1112
AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 0.0
Putative N-terminus
sp_v2.0_unigene11292 SustainPine v2.0 1883
AutoFact: putative CCAAT-binding transcription factor [Oryza sativa Japonica Group] 9.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transcription factor y subunit a-9-like 0.0
Complete
sp_v2.0_unigene11532 SustainPine v2.0 1717
AutoFact: Cytochrome P450 750A1 n=1 Tax=Pinus taeda RepID=C75A1_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 71a1-like 0.0
C-terminus
sp_v2.0_unigene11639 SustainPine v2.0 2367
AutoFact: CBS and DUF21 domain-containing protein [Arabidopsis thaliana] dbj|BAD44531.1| unnamed protein product [Arabidopsis thaliana] gb|AEE83399.1| CBS and DUF21 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=DUF21 domain-containing protein At4g14240; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: duf21 domain-containing protein at4g14240-like 0.0
Complete
sp_v2.0_unigene11760 SustainPine v2.0 708
AutoFact: transcription factor DP1 [Populus tremula x Populus tremuloides] gb|AAP73785.1| DP1 [Populus tremula x Populus tremuloides] 5.99994e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor e2 dimerization partner protein 0.0
C-terminus
sp_v2.0_unigene11763 SustainPine v2.0 729
AutoFact: Putative ripening regulated protein [Oryza sativa Japonica Group] gb|ABF94378.1| MatE family protein, expressed [Oryza sativa Japonica Group] 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein TRANSPARENT TESTA 12 0.0
C-terminus
sp_v2.0_unigene11798 SustainPine v2.0 811
AutoFact: DNA repair protein XRCC3-like protein [Arabidopsis thaliana] ref|NP_851202.1| DNA repair protein XRCC3-like protein [Arabidopsis thaliana] sp|Q9FKM5.1|XRCC3_ARATH RecName: Full=DNA repair protein XRCC3 homolog; AltName: Full=X-ray repair cross-complementi 7.0e-36
FL-Next: sp=DNA repair protein XRCC3 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair protein xrcc3-like protein 2.10195e-44
Internal
sp_v2.0_unigene11948 SustainPine v2.0 619
AutoFact: Brushy protein, putative n=1 Tax=Ricinus communis RepID=B9RTZ8_RICCO 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein brushy 1.4013e-45
N-terminus
sp_v2.0_unigene11960 SustainPine v2.0 1929
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9REC4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine kinase 0.0
Putative C-terminus
sp_v2.0_unigene12026 SustainPine v2.0 544
AutoFact: Tryptophanyl-tRNA synthetase, putative n=1 Tax=Ricinus communis RepID=B9RS09_RICCO 0.0
FL-Next: tr=Tryptophanyl-tRNA synthetase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: tryptophanyl-trna synthetase 0.0
Internal
sp_v2.0_unigene12129 SustainPine v2.0 1202
AutoFact: [R] COG0457 FOG: TPR repeat 5.0e-10
FL-Next: sp=Protein TONSOKU; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein brushy 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain