Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: uma v2.0

Name: Transcription elongation factor S-II, central domain

Term: IPR003618  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uma_v2.0_unigene2815 uma v2.0 1204
AutoFact: SPOC multi-domain protein 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: spoc domain transcription elongation factor s-ii protein 0.0
Internal
uma_v2.0_unigene6693 uma v2.0 2011
AutoFact: bromo-adjacent homology (BAH) domain-containing protein [Arabidopsis thaliana] gb|AAL86355.1| unknown protein [Arabidopsis thaliana] gb|AAM91681.1| unknown protein [Arabidopsis thaliana] gb|AEE83024.1| bromo-adjacent homology (BAH) domain-containing prote 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bah and coiled-coil domain-containing protein 0.0
Putative Complete
uma_v2.0_unigene11267 uma v2.0 858
AutoFact: SPOC multi-domain protein 2.0e-17
Blast2go: spoc domain transcription elongation factor s-ii protein 0.0
Coding
uma_v2.0_unigene20194 uma v2.0 1321
AutoFact: putative elongation factor [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription elongation factor s- 0.0
Putative Complete
uma_v2.0_unigene29471 uma v2.0 251
AutoFact: SPOC multi-domain protein 2.0e-17
Blast2go: spoc domain transcription elongation factor s-ii protein 0.0
Coding
uma_v2.0_unigene37870 uma v2.0 391
AutoFact: putative elongation factor [Arabidopsis thaliana] 7.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription elongation factor s- 2.86401e-30
Putative N-terminus
uma_v2.0_unigene38552 uma v2.0 602
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription elongation factor s- 1.44089e-22
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain