Sustainpine_db
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Assembly Name: uma v2.0

Name: Helix-turn-helix motif

Term: IPR000047  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uma_v2.0_unigene20625 uma v2.0 421
AutoFact: TPA_inf: class IV HD-Zip protein HDZ41 [Physcomitrella patens] 0.0
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeodomain protein 0.0
C-terminus
uma_v2.0_unigene21533 uma v2.0 681
AutoFact: homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana] ref|NP_849596.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana] ref|NP_001184911.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana] sp|Q94C37.1|HDG2_ARATH RecName: Full=H 0.0
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein hdg2 0.0
Internal
uma_v2.0_unigene23731 uma v2.0 397
AutoFact: RecName: Full=Homeobox-leucine zipper protein HOX11; AltName: Full=HD-ZIP protein HOX11; AltName: Full=Homeodomain transcription factor HOX11; AltName: Full=OsHox11 dbj|BAD38229.1| putative homeodomain leucine zipper protein CPHB-3 [Oryza sativa Japonica 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uma_v2.0_unigene23772 uma v2.0 371
AutoFact: Homeobox-leucine zipper-like protein n=2 Tax=Picea RepID=Q3HRT1_PICGL 3.9937e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor 0.0
N-terminus
uma_v2.0_unigene25722 uma v2.0 275
AutoFact: Homeobox-leucine zipper-like protein n=2 Tax=Picea RepID=Q3HRT1_PICGL 9.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper protein athb-13 0.0
N-terminus
uma_v2.0_unigene29066 uma v2.0 515
AutoFact: Homeobox-leucine zipper protein ATHB-4 n=1 Tax=Zea mays RepID=B6UCL5_MAIZE 7.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.26158e-36
C-terminus
uma_v2.0_unigene29584 uma v2.0 158
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 3.28914e-17
Internal
uma_v2.0_unigene31461 uma v2.0 179
AutoFact: Homeodomain protein HB2 n=1 Tax=Picea abies RepID=Q8S555_PICAB 0.0
Blast2go: tpa_inf: class iv hd-zip protein hdz44 0.0
unknown
uma_v2.0_unigene31561 uma v2.0 312
AutoFact: Homeodomain protein HB2 n=1 Tax=Picea abies RepID=Q8S555_PICAB 0.0
Blast2go: tpa_inf: class iv hd-zip protein hdz44 0.0
Coding
uma_v2.0_unigene32142 uma v2.0 327
AutoFact: homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana] ref|NP_849596.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana] ref|NP_001184911.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana] sp|Q94C37.1|HDG2_ARATH RecName: Full=H 0.0
Blast2go: homeobox-leucine zipper protein hdg2 0.0
unknown
uma_v2.0_unigene34527 uma v2.0 274
AutoFact: Homeobox protein, putative n=1 Tax=Ricinus communis RepID=B9SPL4_RICCO 0.0
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein hdg11-like 0.0
Internal
uma_v2.0_unigene34655 uma v2.0 399
AutoFact: Unassigned protein
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein hdg11-like 4.97025e-31
Internal
uma_v2.0_unigene35188 uma v2.0 520
AutoFact: Homeodomain protein HB2 n=1 Tax=Picea abies RepID=Q8S555_PICAB 0.0
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: tpa_inf: class iv hd-zip protein hdz44 0.0
Internal
uma_v2.0_unigene35361 uma v2.0 357
AutoFact: Homeodomain-leucine zipper protein 57 n=1 Tax=Glycine max RepID=Q9SP47_SOYBN 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 3.29305e-43
C-terminus
uma_v2.0_unigene35565 uma v2.0 340
AutoFact: Homeobox 1 n=1 Tax=Picea abies RepID=Q9FR59_PICAB 0.0
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein hdg2-like 0.0
Internal
uma_v2.0_unigene36452 uma v2.0 315
AutoFact: TPA_inf: class IV HD-Zip protein HDZ43 [Physcomitrella patens] 0.0
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein meristem l1 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain