Sustainpine_db
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Assembly Name: uma v2.0

Name: Rab-GTPase-TBC domain

Term: IPR000195  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uma_v2.0_unigene1278 uma v2.0 577
AutoFact: RabGAP/TBC domain-containing protein-like [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: run and tbc1 domain containing 0.0
Internal
uma_v2.0_unigene1492 uma v2.0 1353
AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] dbj|BAD44199.1| GTPase activator protein of Rab-like small GTPases-like protein [Arabidopsis thaliana] gb|AED94745.1| RabGAP/TBC domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtpase-activating protein gyp7-like 0.0
C-terminus
uma_v2.0_unigene1712 uma v2.0 491
AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] dbj|BAE99001.1| hypothetical protein [Arabidopsis thaliana] gb|AED96540.1| RabGAP/TBC domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tbc domain containing protein 0.0
Internal
uma_v2.0_unigene3045 uma v2.0 330
AutoFact: RAB GTPase activator 6.0e-08
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: tbc domain-containing protein 7.29255e-10
N-terminus
uma_v2.0_unigene4977 uma v2.0 785
AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] dbj|BAD44199.1| GTPase activator protein of Rab-like small GTPases-like protein [Arabidopsis thaliana] gb|AED94745.1| RabGAP/TBC domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtpase-activating protein gyp7-like 0.0
N-terminus
uma_v2.0_unigene5270 uma v2.0 323
AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] emb|CAB36837.1| putative protein [Arabidopsis thaliana] emb|CAB78415.1| putative protein [Arabidopsis thaliana] gb|AEE83318.1| RabGAP/TBC domain-containing protein [Arabidopsis thaliana] 0.0
Blast2go: tbc domain-containing protein 0.0
Coding
uma_v2.0_unigene6537 uma v2.0 852
AutoFact: Ric1 rop-interactive CRIB motif-containing protein RIC1 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S3U2_PHYPA 0.0
FL-Next: tr=Ric1 rop-interactive CRIB motif-containing protein RIC1; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: ric1 rop-interactive crib motif-containing protein ric1 0.0
N-terminus
uma_v2.0_unigene6641 uma v2.0 843
AutoFact: RabGAP/TBC domain-containing protein-like [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: run and tbc1 domain containing 0.0
Putative Complete
uma_v2.0_unigene7224 uma v2.0 991
AutoFact: Ric1 rop-interactive CRIB motif-containing protein RIC1 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S3U2_PHYPA 0.0
FL-Next: tr=Ric1 rop-interactive CRIB motif-containing protein RIC1; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: ric1 rop-interactive crib motif-containing protein ric1 0.0
C-terminus
uma_v2.0_unigene7338 uma v2.0 341
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: tbc domain-containing protein 4.69906e-17
N-terminus
uma_v2.0_unigene8598 uma v2.0 1617
AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] gb|AAK43888.1|AF370511_1 Unknown protein [Arabidopsis thaliana] gb|AAC02742.2| expressed protein [Arabidopsis thaliana] gb|AAM91215.1| unknown protein [Arabidopsis thaliana] gb|AEC08431.1| RabGAP 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tbc1 domain family member 22a 0.0
Putative Complete
uma_v2.0_unigene9534 uma v2.0 1937
AutoFact: putative GTPase activator protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
uma_v2.0_unigene9785 uma v2.0 613
AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] dbj|BAE99001.1| hypothetical protein [Arabidopsis thaliana] gb|AED96540.1| RabGAP/TBC domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tbc domain containing protein 0.0
Putative N-terminus
uma_v2.0_unigene9930 uma v2.0 1520
AutoFact: Unassigned protein
FL-Next: tr=Os08g0518100 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: microtubule-associated protein 3.98316e-16
C-terminus
uma_v2.0_unigene9942 uma v2.0 1489
AutoFact: RabGAP/TBC domain-containing protein-like [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: run and tbc1 domain containing 0.0
C-terminus
uma_v2.0_unigene10735 uma v2.0 233
AutoFact: Unassigned protein
Blast2go: microtubule-associated protein 3.98316e-16
unknown
uma_v2.0_unigene12839 uma v2.0 2232
AutoFact: TBC1 domain family member 15 [Pongo abelii] emb|CAH89546.1| hypothetical protein [Pongo abelii] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tbc domain-containing protein 0.0
Putative Complete
uma_v2.0_unigene13054 uma v2.0 648
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: microtubule-associated protein 1.39031e-38
Internal
uma_v2.0_unigene13856 uma v2.0 1214
AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] emb|CAB36837.1| putative protein [Arabidopsis thaliana] emb|CAB78415.1| putative protein [Arabidopsis thaliana] gb|AEE83318.1| RabGAP/TBC domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
uma_v2.0_unigene13874 uma v2.0 1010
AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] emb|CAB36837.1| putative protein [Arabidopsis thaliana] emb|CAB78415.1| putative protein [Arabidopsis thaliana] gb|AEE83318.1| RabGAP/TBC domain-containing protein [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
Putative coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain