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Assembly Name: uma v2.0

Name: Transcription factor TCP subgroup

Term: IPR017887  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uma_v2.0_unigene531 uma v2.0 822
AutoFact: Unassigned protein
unknown
uma_v2.0_unigene5580 uma v2.0 949
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uma_v2.0_unigene7460 uma v2.0 603
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TKA8_VITVI 2.0e-25
Blast2go: tb1-like tcp family transcription factor 3.45064e-29
unknown
uma_v2.0_unigene10328 uma v2.0 454
AutoFact: transcription factor TCP4 [Arabidopsis thaliana] ref|NP_850589.1| transcription factor TCP4 [Arabidopsis thaliana] ref|NP_001189896.1| transcription factor TCP4 [Arabidopsis thaliana] sp|Q8LPR5.1|TCP4_ARATH RecName: Full=Transcription factor TCP4; AltName 9.0e-34
Blast2go: transcription factor tcp4 4.49701e-39
Putative coding
uma_v2.0_unigene13807 uma v2.0 1071
AutoFact: Unassigned protein
Blast2go: tcp transcription factor 11 2.67724e-22
unknown
uma_v2.0_unigene14576 uma v2.0 1086
AutoFact: transcription factor TCP4 [Arabidopsis thaliana] ref|NP_850589.1| transcription factor TCP4 [Arabidopsis thaliana] ref|NP_001189896.1| transcription factor TCP4 [Arabidopsis thaliana] sp|Q8LPR5.1|TCP4_ARATH RecName: Full=Transcription factor TCP4; AltName 9.0e-34
FL-Next: sp=Transcription factor TCP4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription factor tcp4 4.49701e-39
N-terminus
uma_v2.0_unigene20440 uma v2.0 956
AutoFact: DUF1421 multi-domain protein 7.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.96602e-42
C-terminus
uma_v2.0_unigene25597 uma v2.0 413
AutoFact: transcription factor TCP4 [Arabidopsis thaliana] ref|NP_850589.1| transcription factor TCP4 [Arabidopsis thaliana] ref|NP_001189896.1| transcription factor TCP4 [Arabidopsis thaliana] sp|Q8LPR5.1|TCP4_ARATH RecName: Full=Transcription factor TCP4; AltName 9.0e-34
Blast2go: transcription factor tcp4 4.49701e-39
unknown
uma_v2.0_unigene26088 uma v2.0 141
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TKA8_VITVI 2.0e-25
FL-Next: sp=Transcription factor TCP24; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: tb1-like tcp family transcription factor 3.45064e-29
Internal
uma_v2.0_unigene29151 uma v2.0 108
AutoFact: Unassigned protein
Blast2go: tcp transcription factor 11 2.67724e-22
unknown
uma_v2.0_unigene31363 uma v2.0 365
AutoFact: transcription factor TCP9 [Arabidopsis thaliana] sp|O64647.1|TCP9_ARATH RecName: Full=Transcription factor TCP9 gb|AAK43925.1|AF370606_1 putative PCF2-like DNA binding protein [Arabidopsis thaliana] gb|AAC06168.1| putative PCF2-like DNA binding protein [A 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor tcp9-like 1.85e-39
Internal
uma_v2.0_unigene31404 uma v2.0 365
AutoFact: Putative transcription factor PCF6 n=1 Tax=Oryza sativa Japonica Group RepID=Q7XIX9_ORYSJ 1.0e-24
Blast2go: tb1-like tcp family transcription factor 1.37772e-27
Putative coding
uma_v2.0_unigene33273 uma v2.0 624
AutoFact: Putative transcription factor PCF6 n=1 Tax=Oryza sativa Japonica Group RepID=Q7XIX9_ORYSJ 1.0e-24
Blast2go: tb1-like tcp family transcription factor 1.37772e-27
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain