Sustainpine_db
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Assembly Name: uma v2.0

Name: Histone core

Term: IPR007125  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uma_v2.0_unigene144 uma v2.0 704
AutoFact: Histone H4 n=1 Tax=Camellia sinensis RepID=F4YF87_CAMSI 5.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 0.0
Complete
uma_v2.0_unigene213 uma v2.0 1025
AutoFact: Histone H2B n=2 Tax=Picea sitchensis RepID=A9NZJ5_PICSI 4.99997e-41
FL-Next: sp=Histone H2B; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
uma_v2.0_unigene404 uma v2.0 1004
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99993e-41
FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h2b 0.0
Complete
uma_v2.0_unigene1295 uma v2.0 563
AutoFact: putative bHLH transcription factor [Arabidopsis thaliana] 3.0e-39
Blast2go: transcription factor bhlh62-like 0.0
Putative coding
uma_v2.0_unigene3176 uma v2.0 801
AutoFact: Histone H3 n=3 Tax=Eukaryota RepID=B6SJQ5_MAIZE 0.0
FL-Next: tr=Histone 3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h3 0.0
Complete
uma_v2.0_unigene3770 uma v2.0 1051
AutoFact: Histone H2AX n=7 Tax=Spermatophyta RepID=H2AX_PICAB 0.0
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h2a 0.0
Complete
uma_v2.0_unigene4179 uma v2.0 656
AutoFact: Histone H3 n=30 Tax=Eukaryota RepID=H3_ASPFU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone 3 0.0
Complete
uma_v2.0_unigene4658 uma v2.0 863
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 1.0e-24
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 8.9211e-30
Complete
uma_v2.0_unigene5338 uma v2.0 1018
AutoFact: Isoform 2 of Probable carboxylesterase 11 n=1 Tax=Arabidopsis thaliana RepID=Q9LK21-2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable carboxylesterase 11-like 0.0
C-terminus
uma_v2.0_unigene5694 uma v2.0 817
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NTX3_PICSI 9.80909e-45
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 0.0
Putative Complete
uma_v2.0_unigene6431 uma v2.0 965
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 0.0
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone 2 0.0
Complete
uma_v2.0_unigene6855 uma v2.0 635
AutoFact: Isoform 2 of Probable carboxylesterase 11 n=1 Tax=Arabidopsis thaliana RepID=Q9LK21-2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable carboxylesterase 11-like 0.0
C-terminus
uma_v2.0_unigene7035 uma v2.0 438
AutoFact: histone H4 [Hyacinthus orientalis] 5.0e-34
Blast2go: histone h4 4.68034e-43
unknown
uma_v2.0_unigene7435 uma v2.0 825
AutoFact: Histone H2A n=1 Tax=Populus trichocarpa RepID=B9I7E7_POPTR 2.0e-35
FL-Next: sp=Histone H2A; Pinus taeda (Loblolly pine). 0.0
Blast2go: histone h2a-like protein 0.0
Complete
uma_v2.0_unigene7445 uma v2.0 189
AutoFact: histone H4 [Theileria parva strain Muguga] ref|XP_764313.1| histone H4 [Theileria parva strain Muguga] ref|XP_953319.1| histone H4 [Theileria annulata strain Ankara] ref|XP_953321.1| histone H4 [Theileria annulata strain Ankara] emb|CAI76694.1| histone H4 3.0e-20
Blast2go: histone h4 3.54752e-20
unknown
uma_v2.0_unigene7558 uma v2.0 585
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 0.0
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone 2 0.0
Complete
uma_v2.0_unigene7592 uma v2.0 1845
AutoFact: putative bHLH transcription factor [Arabidopsis thaliana] 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor bhlh63-like 0.0
C-terminus
uma_v2.0_unigene10297 uma v2.0 625
AutoFact: Histone H2B.2 n=33 Tax=Spermatophyta RepID=H2B2_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
Complete
uma_v2.0_unigene10353 uma v2.0 265
AutoFact: Histone H3 n=1 Tax=Ostreococcus tauri RepID=Q018N5_OSTTA 0.0
Blast2go: histone h3 0.0
unknown
uma_v2.0_unigene10903 uma v2.0 362
AutoFact: transcription factor bHLH76 [Arabidopsis thaliana] gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana] emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana] gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana] 3.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor bhlh76 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain