Sustainpine_db
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Assembly Name: uma v2.0

Name: SNF2-related

Term: IPR000330  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uma_v2.0_unigene802 uma v2.0 588
AutoFact: SNF2 and helicase domain-containing protein [Arabidopsis thaliana] gb|AAD22300.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06492.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana] 1.0e-28
Blast2go: snf2 family dna-dependent atpase 1.72025e-30
Putative coding
uma_v2.0_unigene1263 uma v2.0 798
AutoFact: AP2 domain-containing transcription factor 7 n=1 Tax=Glycine max RepID=C9WA65_SOYBN 2.0e-31
Blast2go: dehydration responsive element binding protein 7.17662e-34
Coding
uma_v2.0_unigene1373 uma v2.0 278
AutoFact: pfam00271, Helicase_C, Helicase conserved C-terminal domain 6.0e-16
Blast2go: helicase and zinc finger domain-containing protein 0.0
unknown
uma_v2.0_unigene2120 uma v2.0 283
AutoFact: SNF2 and helicase domain-containing protein [Arabidopsis thaliana] gb|AAD22300.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06492.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana] 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf2 family dna-dependent atpase 1.72025e-30
Internal
uma_v2.0_unigene3033 uma v2.0 572
AutoFact: ATPase splayed [Arabidopsis thaliana] gb|AEC08101.1| ATPase splayed [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atpase splayed 0.0
Putative N-terminus
uma_v2.0_unigene3054 uma v2.0 342
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9HEW0_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Internal
uma_v2.0_unigene3167 uma v2.0 351
AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO 0.0
FL-Next: sp=ATP-dependent helicase BRM; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent helicase brm-like 0.0
Internal
uma_v2.0_unigene3380 uma v2.0 244
AutoFact: AP2 domain-containing transcription factor 7 n=1 Tax=Glycine max RepID=C9WA65_SOYBN 2.0e-31
Blast2go: dehydration responsive element binding protein 7.17662e-34
Coding
uma_v2.0_unigene3542 uma v2.0 789
AutoFact: putative U1 snRNP 70K protein [Trifolium pratense] 0.0
Blast2go: u1 small nuclear ribonucleoprotein 70 kda-like 0.0
Coding
uma_v2.0_unigene4156 uma v2.0 969
AutoFact: PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI00019843BD 0.0
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent helicase rhp16-like 0.0
Internal
uma_v2.0_unigene4410 uma v2.0 999
AutoFact: chromodomain-helicase-DNA-binding protein-like protein [Oryza sativa Japonica Group] dbj|BAD30688.1| chromodomain-helicase-DNA-binding protein-like protein [Oryza sativa Japonica Group] 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: chromodomain-helicase-dna-binding protein 6.78532e-28
C-terminus
uma_v2.0_unigene4631 uma v2.0 632
AutoFact: PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI00019843BD 0.0
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent helicase rhp16-like 0.0
Internal
uma_v2.0_unigene4902 uma v2.0 772
AutoFact: PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI0001983C0B 0.0
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: helicase-like transcription factor-like protein 0.0
Internal
uma_v2.0_unigene5130 uma v2.0 1452
AutoFact: SNF2 and helicase domain-containing protein [Arabidopsis thaliana] gb|AAC97224.1| putative helicase [Arabidopsis thaliana] gb|AAL24339.1| SNF2/RAD54 family (ETL1 subfamily) protein [Arabidopsis thaliana] gb|AAO00936.1| SNF2/RAD54 family (ETL1 subfamily) p 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf2 family dna-dependent atpase 0.0
Putative C-terminus
uma_v2.0_unigene5252 uma v2.0 1977
AutoFact: Putative SWI/SNF related, matrix associated, actin dependent regulator of chromatin [Oryza sativa] dbj|BAB64747.1| putative DNA-dependent ATPase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
uma_v2.0_unigene5336 uma v2.0 449
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9H8P5_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna repair and recombination protein 0.0
Internal
uma_v2.0_unigene5620 uma v2.0 663
AutoFact: TATA box binding protein (TBP) associated factor (TAF)-like protein [Arabidopsis thaliana] 0.0
Blast2go: tata-binding protein-associated factor 0.0
Putative coding
uma_v2.0_unigene5800 uma v2.0 1200
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9I6D4_POPTR 0.0
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: tata box binding protein associated factor-like protein 0.0
Internal
uma_v2.0_unigene6010 uma v2.0 333
AutoFact: SNF2 and helicase domain-containing protein [Arabidopsis thaliana] gb|AAC97224.1| putative helicase [Arabidopsis thaliana] gb|AAL24339.1| SNF2/RAD54 family (ETL1 subfamily) protein [Arabidopsis thaliana] gb|AAO00936.1| SNF2/RAD54 family (ETL1 subfamily) p 0.0
FL-Next: sp=Probable chromatin-remodeling complex ATPase chain; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: snf2 family dna-dependent atpase 0.0
Internal
uma_v2.0_unigene6101 uma v2.0 522
AutoFact: pfam00271, Helicase_C, Helicase conserved C-terminal domain 6.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: helicase and zinc finger domain-containing protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain