Sustainpine_db
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Assembly Name: uma v2.0

Name: Flagellar basal body rod protein, conserved site

Term: IPR019776  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uma_v2.0_unigene4184 uma v2.0 423
• AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 0.0
• FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: phytochrome 0.0
Internal
uma_v2.0_unigene6724 uma v2.0 1251
• AutoFact: Phytochrome n=1 Tax=Marchantia paleacea var. diptera RepID=Q9AVP3_MARPA 0.0
• FL-Next: sp=Phytochrome; Pinus sylvestris (Scots pine). 0.0
• Blast2go: phytochrome 0.0
C-terminus
uma_v2.0_unigene11386 uma v2.0 481
• AutoFact: Phytochrome n=43 Tax=Spermatophyta RepID=PHY_PINSY 0.0
• FL-Next: sp=Phytochrome; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: phytochrome p 0.0
Internal
uma_v2.0_unigene12240 uma v2.0 856
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative N-terminus
uma_v2.0_unigene22878 uma v2.0 162
• AutoFact: Phytochrome n=1 Tax=Marchantia paleacea var. diptera RepID=Q9AVP3_MARPA 0.0
• FL-Next: sp=Phytochrome; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: phytochrome 0.0
Internal
uma_v2.0_unigene22896 uma v2.0 385
• AutoFact: Phytochrome n=43 Tax=Spermatophyta RepID=PHY_PINSY 0.0
• FL-Next: sp=Phytochrome; Pinus sylvestris (Scots pine). 0.0
• Blast2go: phytochrome p 0.0
Internal
uma_v2.0_unigene25890 uma v2.0 304
• AutoFact: Phytochrome n=1 Tax=Marchantia paleacea var. diptera RepID=Q9AVP3_MARPA 0.0
• FL-Next: sp=Phytochrome; Pinus sylvestris (Scots pine). 0.0
• Blast2go: phytochrome 0.0
Internal
uma_v2.0_unigene30737 uma v2.0 232
• AutoFact: WS0423.C21_M11 SS-NE-27 Picea sitchensis cDNA clone WS0423_M11 3', mRNA sequence. 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: thioredoxin family protein 0.0
C-terminus
uma_v2.0_unigene33735 uma v2.0 403
• AutoFact: SCARECROW n=1 Tax=Pinus sylvestris RepID=Q0MRQ2_PINSY 0.0
• FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
• Blast2go: gras family transcription factor 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain