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Assembly Name: uma v2.0

Name: Myb domain, DNA-binding

Term: IPR017930  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uma_v2.0_unigene18 uma v2.0 645
AutoFact: Myb transcription factor [Vitis vinifera] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uma_v2.0_unigene51 uma v2.0 478
AutoFact: DNA-binding protein PcMYB1, putative [Arabidopsis thaliana] 0.0
Blast2go: telomere repeat binding factor 1 0.0
unknown
uma_v2.0_unigene391 uma v2.0 665
AutoFact: MYB transcription factor MYB136 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor asg4-like 0.0
N-terminus
uma_v2.0_unigene480 uma v2.0 417
AutoFact: myb family transcription factor-related protein [Populus tomentosa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: myb family transcription factor apl-like 0.0
Internal
uma_v2.0_unigene576 uma v2.0 590
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RJX9_RICCO 4.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding protein 9.80909e-44
Putative N-terminus
uma_v2.0_unigene872 uma v2.0 641
AutoFact: type-B response regulator [Catharanthus roseus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: type-b response regulator 0.0
Internal
uma_v2.0_unigene873 uma v2.0 1703
AutoFact: histone H1-like protein [Zea mays] gb|ACN27409.1| unknown [Zea mays] 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: single myb histone 0.0
Complete
uma_v2.0_unigene950 uma v2.0 690
AutoFact: transcription factor DcMYB5 [Daucus carota] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor tt2-like 0.0
Internal
uma_v2.0_unigene1026 uma v2.0 1489
AutoFact: Histone H1.1, putative n=1 Tax=Ricinus communis RepID=B9SH10_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: telomere repeat binding factor 1 0.0
C-terminus
uma_v2.0_unigene1040 uma v2.0 1787
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SGW9_RICCO 9.80909e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: two-component response regulator ehd1 0.0
Complete
uma_v2.0_unigene1106 uma v2.0 725
AutoFact: MYB transcription factor MYB107 [Glycine max] 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: telomere repeat binding factor 1 0.0
C-terminus
uma_v2.0_unigene1144 uma v2.0 2291
AutoFact: myb-like HTH transcriptional regulator family protein [Arabidopsis thaliana] ref|NP_974298.1| myb-like HTH transcriptional regulator family protein [Arabidopsis thaliana] gb|AAK92826.1| unknown protein [Arabidopsis thaliana] gb|AAM20308.1| unknown protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: two-component response regulator arr 0.0
Complete
uma_v2.0_unigene1327 uma v2.0 622
AutoFact: Putative type-b response regulator (Sensor histidine kinase) n=1 Tax=Malus x domestica RepID=E4Z8Q8_MALDO 8.00001e-41
Blast2go: two-component response regulator arr2-like 1.00893e-43
Putative coding
uma_v2.0_unigene1423 uma v2.0 308
AutoFact: MYB transcription factor MIXTA-like 2 [Antirrhinum majus] 0.0
Blast2go: myb27 protein 0.0
unknown
uma_v2.0_unigene1558 uma v2.0 640
AutoFact: BTB/POZ; Superoxide dismutase, copper/zinc binding; NPH3 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: btb poz domain-containing protein at5g66560-like 0.0
Internal
uma_v2.0_unigene1961 uma v2.0 463
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7SLJ7_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
uma_v2.0_unigene2400 uma v2.0 379
AutoFact: Putative type-b response regulator (Sensor histidine kinase) n=1 Tax=Malus x domestica RepID=E4Z8Q8_MALDO 8.00001e-41
Blast2go: two-component response regulator arr2-like 1.00893e-43
unknown
uma_v2.0_unigene2530 uma v2.0 767
AutoFact: C1, C1-B73, C1-I, c1-I-2K1; myb-related protein c1-I-2K1 6.0e-12
FL-Next: tr=MYB-like protein; Taxus globosa. 0.0
Blast2go: myb-like transcription factor 3 3.38981e-14
Putative C-terminus
uma_v2.0_unigene2636 uma v2.0 333
AutoFact: RecName: Full=40S ribosomal protein S23; AltName: Full=S12 gb|AAA79921.1| putative 40S ribosomal protein s12 [Fragaria x ananassa] 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s23 3.68378e-28
N-terminus
uma_v2.0_unigene2882 uma v2.0 482
AutoFact: MYB8 transcription factor n=4 Tax=Pinaceae RepID=D7GLD4_PINPS 1.0e-23
FL-Next: tr=R2R3-MYB transcription factor MYB8; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: myb domain protein 55 2.12567e-29
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain