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Assembly Name: uma v2.0

Name: Spen paralogue and orthologue SPOC, C-terminal

Term: IPR012921  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uma_v2.0_unigene19 uma v2.0 806
AutoFact: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 [Arabidopsis thaliana] sp|Q67ZE1.2|HSDD2_ARATH RecName: Full=3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2; Short=At3BETAHSD/D2; AltName: Full=4alpha-carboxysterol-C3-dehydrogenase/C4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3beta-hydroxysteroid-dehydrogenase decarboxylase isoform 2 0.0
Internal
uma_v2.0_unigene2815 uma v2.0 1204
AutoFact: SPOC multi-domain protein 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: spoc domain transcription elongation factor s-ii protein 0.0
Internal
uma_v2.0_unigene4096 uma v2.0 522
AutoFact: nucleic acid binding protein [Arabidopsis thaliana] gb|AAM13844.1| unknown protein [Arabidopsis thaliana] gb|AEE30872.1| nucleic acid binding protein [Arabidopsis thaliana] 1.0e-16
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: nucleic acid binding protein 5.54161e-25
Internal
uma_v2.0_unigene4949 uma v2.0 1621
AutoFact: FPA (Fragment) n=1 Tax=Pisum sativum RepID=Q52ZH7_PEA 6.00036e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flowering time control protein fpa 7.00649e-45
C-terminus
uma_v2.0_unigene6553 uma v2.0 437
AutoFact: Ubiquitin system component Cue protein [Arabidopsis thaliana] gb|AEE30873.1| Ubiquitin system component Cue protein [Arabidopsis thaliana] 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: ubiquitin system component cue protein 6.34634e-37
Internal
uma_v2.0_unigene9346 uma v2.0 1267
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SEZ1_RICCO 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flowering time control protein fpa 0.0
C-terminus
uma_v2.0_unigene11267 uma v2.0 858
AutoFact: SPOC multi-domain protein 2.0e-17
Blast2go: spoc domain transcription elongation factor s-ii protein 0.0
Coding
uma_v2.0_unigene12059 uma v2.0 460
AutoFact: Ubiquitin system component Cue protein n=1 Tax=Arabidopsis thaliana RepID=B3H6L4_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: ubiquitin system component cue protein 0.0
Internal
uma_v2.0_unigene14120 uma v2.0 807
AutoFact: RNA recognition motif-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SU08_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flowering time control protein fpa 0.0
Putative N-terminus
uma_v2.0_unigene21427 uma v2.0 354
AutoFact: RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gb|AEE83159.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uma_v2.0_unigene26195 uma v2.0 170
AutoFact: Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating n=1 Tax=Zea mays RepID=B6TKP9_MAIZE 5.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3beta-hydroxysteroid-dehydrogenase decarboxylase isoform 1 8.77759e-41
Internal
uma_v2.0_unigene27508 uma v2.0 300
AutoFact: RNA recognition motif-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SU08_RICCO 0.0
Blast2go: flowering time control protein fpa 0.0
Coding
uma_v2.0_unigene28858 uma v2.0 143
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
uma_v2.0_unigene29471 uma v2.0 251
AutoFact: SPOC multi-domain protein 2.0e-17
Blast2go: spoc domain transcription elongation factor s-ii protein 0.0
Coding
uma_v2.0_unigene32321 uma v2.0 173
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
Internal
uma_v2.0_unigene33535 uma v2.0 356
AutoFact: RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gb|AEE83159.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain