Sustainpine_db
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Assembly Name: uma v2.0

Name: RNA helicase, ATP-dependent, DEAD-box, conserved site

Term: IPR000629  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uma_v2.0_unigene230 uma v2.0 1317
AutoFact: DEAD box protein P68 [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uma_v2.0_unigene709 uma v2.0 781
AutoFact: ATP-dependent RNA helicase (ISS) [Ostreococcus tauri] emb|CAL55992.1| ATP-dependent RNA helicase (ISS) [Ostreococcus tauri] 0.0
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 27; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 0.0
C-terminus
uma_v2.0_unigene1157 uma v2.0 773
AutoFact: cytochrome P450, family 86, subfamily C, polypeptide 3 [Arabidopsis thaliana] gb|AAY34172.1| At1g13140 [Arabidopsis thaliana] gb|AEE28974.1| cytochrome P450, family 86, subfamily C, polypeptide 3 [Arabidopsis thaliana] 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 0.0
C-terminus
uma_v2.0_unigene1159 uma v2.0 483
AutoFact: PRP38_assoc multi-domain protein 3.0e-09
Coding
uma_v2.0_unigene1239 uma v2.0 987
AutoFact: DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana] sp|Q9FNM7.2|RH26_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 26 gb|AED91329.1| DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna helicase 0.0
C-terminus
uma_v2.0_unigene1272 uma v2.0 1687
AutoFact: DEAD-box ATP-dependent RNA helicase 6 n=6 Tax=BEP clade RepID=RH6_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 8-like 0.0
C-terminus
uma_v2.0_unigene1274 uma v2.0 487
AutoFact: Subtilisin-like protein n=1 Tax=Picea abies RepID=Q40764_PICAB 5.0e-39
FL-Next: tr=Subtilisin-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: protein 1.4013e-44
Internal
uma_v2.0_unigene1320 uma v2.0 296
AutoFact: DEAD-box ATP-dependent RNA helicase 50 [Arabidopsis thaliana] sp|Q8GUG7.2|RH50_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 50 gb|AAF27002.1|AC016827_13 putative DEAD/DEAH box helicase [Arabidopsis thaliana] gb|AAK82522.1| AT3g06980/F17A9_13 [A 3.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 50-like 0.0
Internal
uma_v2.0_unigene1360 uma v2.0 620
AutoFact: DEAD box protein P68 [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uma_v2.0_unigene1461 uma v2.0 536
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SAD3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead box rna helicase 0.0
Putative C-terminus
uma_v2.0_unigene1933 uma v2.0 2523
AutoFact: Xylem serine proteinase 1, putative n=1 Tax=Ricinus communis RepID=B9SF18_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: subtilisin-like protease 0.0
Complete
uma_v2.0_unigene2908 uma v2.0 406
AutoFact: DEAD box protein P68 [Pisum sativum] 0.0
FL-Next: sp=Putative DEAD-box ATP-dependent RNA helicase 43; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Putative N-terminus
uma_v2.0_unigene3242 uma v2.0 1328
AutoFact: ATP-dependent RNA helicase (ISS) [Ostreococcus tauri] emb|CAL55992.1| ATP-dependent RNA helicase (ISS) [Ostreococcus tauri] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uma_v2.0_unigene3542 uma v2.0 789
AutoFact: putative U1 snRNP 70K protein [Trifolium pratense] 0.0
Blast2go: u1 small nuclear ribonucleoprotein 70 kda-like 0.0
Coding
uma_v2.0_unigene3717 uma v2.0 744
AutoFact: subtilisin-like serine protease [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: subtilisin-like protease-like 0.0
C-terminus
uma_v2.0_unigene3875 uma v2.0 3181
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 8 dbj|BAD25226.1| putative RNA helicase [Oryza sativa Japonica Group] dbj|BAG92832.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEE57460.1| hypothetical protein OsJ_07688 [Oryza sativa Japon 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 8-like 0.0
Complete
uma_v2.0_unigene3897 uma v2.0 958
AutoFact: putative subtilisin serine protease [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: subtilisin-like protease-like 0.0
Internal
uma_v2.0_unigene4016 uma v2.0 610
AutoFact: ATP binding protein [Arabidopsis thaliana] gb|AAR97892.1| [4Fe-4S] cluster assembly factor [Arabidopsis thaliana] dbj|BAE98532.1| putative mrp protein [Arabidopsis thaliana] gb|AEE76897.1| ATP binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein mrp homolog 0.0
Internal
uma_v2.0_unigene4062 uma v2.0 479
AutoFact: putative DEAD box-like RNA helicase [Oryza sativa Japonica Group] dbj|BAD19277.1| putative DEAD box-like RNA helicase [Oryza sativa Japonica Group] 0.0
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dead box-like rna helicase 0.0
C-terminus
uma_v2.0_unigene4655 uma v2.0 674
AutoFact: DEAD-box ATP-dependent RNA helicase 57 [Arabidopsis thaliana] sp|Q84TG1.1|RH57_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 57 gb|AAO64768.1| At3g09720 [Arabidopsis thaliana] dbj|BAE99340.1| RNA helicase like protein [Arabidopsis thaliana] gb|A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 57 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain