Sustainpine_db
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Assembly Name: uma v2.0

Name: WD40 repeat, conserved site

Term: IPR019775  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uma_v2.0_unigene6 uma v2.0 527
AutoFact: zf-UBR domain containing protein 8.0e-29
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: protein 0.0
Internal
uma_v2.0_unigene182 uma v2.0 1185
AutoFact: cellulose synthase 6 [Populus tremuloides] 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase 0.0
C-terminus
uma_v2.0_unigene224 uma v2.0 1305
AutoFact: Beta-galactosidase n=1 Tax=Picea sitchensis RepID=B8LLU8_PICSI 0.0
FL-Next: sp=Beta-galactosidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-galactosidase 8-like isoform 1 0.0
C-terminus
uma_v2.0_unigene255 uma v2.0 520
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|O64766.1|PP185_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g35030, mitochondrial; Flags: Precursor gb|AAC12843.1| hypothetical protein [Arabidopsis thaliana] gb|A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uma_v2.0_unigene258 uma v2.0 670
AutoFact: Pentatricopeptide repeat protein 79 (Fragment) n=2 Tax=Funariaceae RepID=F5CAE5_FUNHY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative C-terminus
uma_v2.0_unigene318 uma v2.0 1014
AutoFact: WD-40 repeat-containing protein [Nostoc sp. PCC 7120] dbj|BAB77807.1| WD-40 repeat protein [Nostoc sp. PCC 7120] 6.0e-12
FL-Next: tr=Putative uncharacterized protein Sb07g026250; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: wd-40 repeat protein 0.0
C-terminus
uma_v2.0_unigene374 uma v2.0 2215
AutoFact: Protein arginine n-methyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RT51_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-arginine methyltransferase carm1 0.0
Complete
uma_v2.0_unigene389 uma v2.0 1882
AutoFact: WD repeat and SOF domain-containing protein 1 [Arabidopsis thaliana] gb|AAK50083.1|AF372943_1 AT4g28450/F20O9_130 [Arabidopsis thaliana] gb|AAK73982.1| AT4g28450/F20O9_130 [Arabidopsis thaliana] gb|AAN28840.1| At4g28450/F20O9_130 [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ddb1- and cul4-associated factor 0.0
Complete
uma_v2.0_unigene409 uma v2.0 775
AutoFact: wall-associated kinase 4-like [Oryza sativa Japonica Group] dbj|BAG94677.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uma_v2.0_unigene431 uma v2.0 523
AutoFact: Os07g0121200 protein n=3 Tax=Oryza sativa Japonica Group RepID=Q0D8X3_ORYSJ 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase receptor type precursor 0.0
Internal
uma_v2.0_unigene440 uma v2.0 513
AutoFact: STYLOSA protein n=1 Tax=Antirrhinum majus RepID=Q6H976_ANTMA 5.0e-38
FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcriptional corepressor leunig-like isoform 2 2.56438e-43
Internal
uma_v2.0_unigene453 uma v2.0 619
AutoFact: Cytochrome P450, putative n=1 Tax=Ricinus communis RepID=B9RFU0_RICCO 0.0
Blast2go: protein lutein deficient chloroplastic-like 0.0
Putative coding
uma_v2.0_unigene608 uma v2.0 218
AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
Blast2go: protein 0.0
unknown
uma_v2.0_unigene615 uma v2.0 368
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at1g20230 0.0
Internal
uma_v2.0_unigene623 uma v2.0 279
AutoFact: Prp8 binding protein [Arabidopsis thaliana] gb|AAB64029.1| putative splicing factor [Arabidopsis thaliana] gb|AAM13181.1| putative splicing factor [Arabidopsis thaliana] gb|AAP68267.1| At2g43770 [Arabidopsis thaliana] gb|AEC10322.1| Prp8 binding protein [ 0.0
Blast2go: u5 small nuclear ribonucleoprotein 40 kda 0.0
unknown
uma_v2.0_unigene625 uma v2.0 525
AutoFact: EamA-like transporter family protein [Arabidopsis thaliana] emb|CAA16575.1| putative protein [Arabidopsis thaliana] emb|CAB79932.1| putative protein [Arabidopsis thaliana] gb|AAL09778.1| AT4g32140/F10N7_50 [Arabidopsis thaliana] gb|AAM47365.1| AT4g32140/F 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized vacuolar membrane protein yml018c-like 0.0
N-terminus
uma_v2.0_unigene630 uma v2.0 247
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 2.86871e-24
Putative N-terminus
uma_v2.0_unigene640 uma v2.0 391
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAA77766.1| FAS2 [Arabidopsis thaliana] dbj|BAB11430.1| FAS2 [Arabidopsis thaliana] gb|AED97930.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
Blast2go: transducin wd40 domain-containing protein 0.0
Coding
uma_v2.0_unigene657 uma v2.0 1596
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|ACI46510.1| At5g11240 [Arabidopsis thaliana] gb|AED91651.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: wd40 repeat-containing protein smu1 0.0
Putative C-terminus
uma_v2.0_unigene682 uma v2.0 412
AutoFact: BY-2 kinesin-like protein 10 [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kinesin-like protein kif2a-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain