Sustainpine_db
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Assembly Name: uma v2.0

Name: WD40 repeat, conserved site

Term: IPR019775  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uma_v2.0_unigene3033 uma v2.0 572
AutoFact: ATPase splayed [Arabidopsis thaliana] gb|AEC08101.1| ATPase splayed [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atpase splayed 0.0
Putative N-terminus
uma_v2.0_unigene3035 uma v2.0 1102
AutoFact: Pentatricopeptide repeat protein 79 (Fragment) n=2 Tax=Funariaceae RepID=F5CAE5_FUNHY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
uma_v2.0_unigene3054 uma v2.0 342
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9HEW0_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Internal
uma_v2.0_unigene3093 uma v2.0 536
AutoFact: Serine/threonine-protein phosphatase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TP64_VITVI 0.0
FL-Next: sp=Serine/threonine-protein phosphatase BSL1 homolog; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: serine threonine protein phosphatase 0.0
Internal
uma_v2.0_unigene3108 uma v2.0 494
AutoFact: RecName: Full=Vacuolar protein sorting-associated protein 41 homolog gb|AAB60857.1| VPS41 [Solanum lycopersicum] 0.0
FL-Next: sp=Vacuolar protein sorting-associated protein 41 homolog; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: vacuolar protein sorting-associated protein 41 homolog 0.0
Internal
uma_v2.0_unigene3138 uma v2.0 729
AutoFact: F-box and wd40 domain protein, putative n=1 Tax=Ricinus communis RepID=B9S6L1_RICCO 0.0
FL-Next: sp=F-box/WD-40 repeat-containing protein At5g21040; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: at5g21040-like protein 0.0
Internal
uma_v2.0_unigene3175 uma v2.0 501
AutoFact: Receptor-like protein kinase THESEUS 1 n=3 Tax=rosids RepID=THE1_ARATH 0.0
FL-Next: sp=Receptor-like protein kinase THESEUS 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: kinase-like protein 0.0
Internal
uma_v2.0_unigene3182 uma v2.0 543
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAE44475.1| WD repeat protein [Arabidopsis thaliana] gb|AEE85686.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uma_v2.0_unigene3193 uma v2.0 270
AutoFact: Serine-threonine protein kinase, plant-type, putative n=1 Tax=Ricinus communis RepID=B9S0Y8_RICCO 2.0e-15
FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
Blast2go: leucine-rich repeat receptor-like protein kinase 2.34392e-18
Internal
uma_v2.0_unigene3235 uma v2.0 2638
AutoFact: Unassigned protein
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
uma_v2.0_unigene3274 uma v2.0 1057
AutoFact: Receptor serine-threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RT11_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine protein kinase 0.0
C-terminus
uma_v2.0_unigene3315 uma v2.0 497
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q84JR3.1|PP334_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21705, mitochondrial; Flags: Precursor gb|AAO42004.1| unknown protein [Arabidopsis thaliana] gb|AAO505 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 0.0
Internal
uma_v2.0_unigene3329 uma v2.0 2055
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9SRX4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
uma_v2.0_unigene3472 uma v2.0 1693
AutoFact: Coatomer alpha subunit n=1 Tax=Hordeum vulgare subsp. vulgare RepID=Q6RYF4_HORVD 0.0
FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: coatomer alpha 0.0
C-terminus
uma_v2.0_unigene3473 uma v2.0 1039
AutoFact: F-box protein [Arabidopsis thaliana] sp|Q94C27.1|FB84_ARATH RecName: Full=F-box protein At1g70590 gb|AAK59789.1| At1g70590/F5A18_23 [Arabidopsis thaliana] gb|AAO11593.1| At1g70590/F5A18_23 [Arabidopsis thaliana] gb|AEE35086.1| F-box protein [Arabidopsis t 0.0
FL-Next: sp=F-box protein At1g70590; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein 0.0
C-terminus
uma_v2.0_unigene3581 uma v2.0 508
AutoFact: Beige/BEACH and WD40 domain-containing protein n=2 Tax=Arabidopsis thaliana RepID=F4JHT3_ARATH 0.0
FL-Next: tr=Beige/BEACH and WD40 domain-containing protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uma_v2.0_unigene3658 uma v2.0 356
AutoFact: STY-L protein n=1 Tax=Antirrhinum majus RepID=Q6H975_ANTMA 2.0e-22
FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: leunig-like protein 9.61843e-26
Internal
uma_v2.0_unigene3674 uma v2.0 2068
AutoFact: armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] emb|CAC01878.1| putative protein [Arabidopsis thaliana] gb|AAM13237.1| putative protein [Arabidopsis thaliana] gb|AAM67181.1| unknown [Arabidopsis thaliana] gb|AAN65128.1| putati 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Complete
uma_v2.0_unigene3691 uma v2.0 1739
AutoFact: Protein kinase [Medicago truncatula] 0.0
FL-Next: sp=Protein kinase 2B, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein kinase 0.0
Complete
uma_v2.0_unigene3708 uma v2.0 1054
AutoFact: putative protein kinase Xa21 [Oryza sativa Japonica Group] 2.94273e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lrr receptor-like serine threonine-protein kinase fls2-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain