Sustainpine_db
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Assembly Name: biogeco1 v2.0

Name: Helix-turn-helix motif

Term: IPR000047  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog1_v2.0_unigene103 biogeco1 v2.0 756
AutoFact: DNA-binding protein (Fragment) n=1 Tax=Catharanthus roseus RepID=A1DR78_CATRO 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hdzip i protein 0.0
N-terminus
biog1_v2.0_unigene1268 biogeco1 v2.0 1490
AutoFact: Homeobox 1 n=1 Tax=Picea abies RepID=Q9FR59_PICAB 0.0
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein hdg2-like 0.0
C-terminus
biog1_v2.0_unigene2609 biogeco1 v2.0 453
AutoFact: TPA_inf: class IV HD-Zip protein HDZ41 [Physcomitrella patens] 0.0
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeodomain protein 0.0
C-terminus
biog1_v2.0_unigene4020 biogeco1 v2.0 1740
AutoFact: homeodomain-leucine zipper protein 57 [Glycine max] 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper protein hat5-like 0.0
Complete
biog1_v2.0_unigene4105 biogeco1 v2.0 2450
AutoFact: homeodomain-leucine zipper protein 57 [Glycine max] 5.0e-34
FL-Next: Isoform 2 of Homeobox-leucine zipper protein HAT7 OS=Arabidopsis thaliana GN=HAT7 0.0
Blast2go: homeobox-leucine zipper protein athb-6-like 2.01282e-38
Complete
biog1_v2.0_unigene4413 biogeco1 v2.0 2545
AutoFact: TPA_inf: class IV HD-Zip protein HDZ43 [Physcomitrella patens] 0.0
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein meristem l1 0.0
C-terminus
biog1_v2.0_unigene5616 biogeco1 v2.0 1331
AutoFact: homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana] ref|NP_849596.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana] ref|NP_001184911.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana] sp|Q94C37.1|HDG2_ARATH RecName: Full=H 0.0
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein hdg2 0.0
N-terminus
biog1_v2.0_unigene6406 biogeco1 v2.0 1750
AutoFact: homeodomain-leucine zipper protein 56 [Glycine max] 8.00001e-41
FL-Next: sp=Homeobox-leucine zipper protein HOX20; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: homeobox-leucine zipper protein athb-6-like 0.0
Complete
biog1_v2.0_unigene6536 biogeco1 v2.0 1663
AutoFact: Homeobox protein, putative n=1 Tax=Ricinus communis RepID=B9R943_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper protein hat5-like 0.0
Complete
biog1_v2.0_unigene9400 biogeco1 v2.0 1150
AutoFact: Homeobox-leucine zipper-like protein n=2 Tax=Picea RepID=Q3HRT1_PICGL 3.9937e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor 0.0
Complete
biog1_v2.0_unigene10699 biogeco1 v2.0 1465
AutoFact: Homeobox-leucine zipper-like protein n=2 Tax=Picea RepID=Q3HRT1_PICGL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hd domain class transcription factor 0.0
Complete
biog1_v2.0_unigene11318 biogeco1 v2.0 461
AutoFact: DNA-binding protein (Fragment) n=1 Tax=Catharanthus roseus RepID=A1DR78_CATRO 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hdzip i protein 0.0
C-terminus
biog1_v2.0_unigene16096 biogeco1 v2.0 908
AutoFact: Homeobox-leucine zipper protein HAT2 n=3 Tax=Brassicaceae RepID=HAT2_ARATH 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper protein hat1 2.1949e-37
Putative Complete
biog1_v2.0_unigene16306 biogeco1 v2.0 277
AutoFact: homeodomain-leucine zipper protein 57 [Glycine max] 5.0e-34
Blast2go: homeobox-leucine zipper protein athb-6-like 2.01282e-38
unknown
biog1_v2.0_unigene17003 biogeco1 v2.0 235
AutoFact: Homeobox-leucine zipper-like protein n=2 Tax=Picea RepID=Q3HRT1_PICGL 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper protein athb-6-like 5.02872e-28
Internal
biog1_v2.0_unigene18069 biogeco1 v2.0 504
AutoFact: TPA_inf: class IV HD-Zip protein HDZ41 [Physcomitrella patens] 0.0
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeodomain protein 0.0
Internal
biog1_v2.0_unigene18924 biogeco1 v2.0 519
AutoFact: RecName: Full=Homeobox-leucine zipper protein HOX11; AltName: Full=HD-ZIP protein HOX11; AltName: Full=Homeodomain transcription factor HOX11; AltName: Full=OsHox11 dbj|BAD38229.1| putative homeodomain leucine zipper protein CPHB-3 [Oryza sativa Japonica 4.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper protein hat14-like 0.0
N-terminus
biog1_v2.0_unigene19500 biogeco1 v2.0 1554
AutoFact: Homeobox-leucine zipper-like protein n=2 Tax=Picea RepID=Q3HRT1_PICGL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hd domain class transcription factor 0.0
Complete
biog1_v2.0_unigene21950 biogeco1 v2.0 590
AutoFact: type II homeodomain-leucine zipper protein [Medicago sativa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog1_v2.0_unigene23885 biogeco1 v2.0 593
AutoFact: Homeobox protein, putative n=1 Tax=Ricinus communis RepID=B9SPL4_RICCO 0.0
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein hdg11-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain