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Assembly Name: biogeco1 v2.0

Name: Ribosomal protein L18e

Term: IPR000039  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog1_v2.0_unigene250 biogeco1 v2.0 862
• AutoFact: Trehalose-6-phosphate synthase n=1 Tax=Ginkgo biloba RepID=Q5D6D9_GINBI 0.0
• FL-Next: sp=Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: trehalose-phosphate synthase 0.0
Internal
biog1_v2.0_unigene6357 biogeco1 v2.0 730
• AutoFact: glycerol-3-phosphate acyltransferase [Arabidopsis thaliana] sp|Q9LMM0.1|GPAT4_ARATH RecName: Full=Glycerol-3-phosphate acyltransferase 4; Short=AtGPAT4 gb|AAF81319.1|AC061957_15 Contains similarity to a hypothetical protein F16M14.4 gi|7485589 from Arabid 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: er glycerol-phosphate acyltransferase 0.0
C-terminus
biog1_v2.0_unigene8268 biogeco1 v2.0 1097
• AutoFact: Trehalose-6-phosphate synthase n=1 Tax=Ginkgo biloba RepID=Q5D6D9_GINBI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: trehalose-phosphate synthase 0.0
Complete
biog1_v2.0_unigene8500 biogeco1 v2.0 1911
• AutoFact: Trehalose-6-phosphate synthase n=1 Tax=Ginkgo biloba RepID=Q5D6D9_GINBI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: trehalose-phosphate synthase 0.0
Putative Complete
biog1_v2.0_unigene9661 biogeco1 v2.0 1018
• AutoFact: 60S ribosomal protein L18-3 [Arabidopsis thaliana] sp|Q940B0.1|RL183_ARATH RecName: Full=60S ribosomal protein L18-3 gb|AAL07220.1| putative 60S ribosomal protein [Arabidopsis thaliana] gb|AAM67529.1| putative 60S ribosomal protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l18-3-like 0.0
Complete
biog1_v2.0_unigene9730 biogeco1 v2.0 1837
• AutoFact: glycerol-3-phosphate acyltransferase 6 [Arabidopsis thaliana] sp|O80437.1|GPAT6_ARATH RecName: Full=Glycerol-3-phosphate acyltransferase 6; Short=AtGPAT6 gb|AAC27160.1| unknown protein [Arabidopsis thaliana] gb|AAL32799.1| Unknown protein [Arabidopsis tha 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
biog1_v2.0_unigene16648 biogeco1 v2.0 527
• AutoFact: Trehalose-6-phosphate synthase n=1 Tax=Ginkgo biloba RepID=Q5D6D9_GINBI 0.0
• FL-Next: Isoform 2 of Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 OS=Arabidopsis thaliana GN=TPS6 0.0
• Blast2go: trehalose-phosphate synthase 0.0
Internal
biog1_v2.0_unigene17526 biogeco1 v2.0 520
• AutoFact: Trehalose-6-phosphate synthase n=1 Tax=Ginkgo biloba RepID=Q5D6D9_GINBI 0.0
• FL-Next: sp=Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: trehalose-phosphate synthase 0.0
Internal
biog1_v2.0_unigene28423 biogeco1 v2.0 322
• AutoFact: glycerol-3-phosphate acyltransferase [Arabidopsis thaliana] sp|Q9LMM0.1|GPAT4_ARATH RecName: Full=Glycerol-3-phosphate acyltransferase 4; Short=AtGPAT4 gb|AAF81319.1|AC061957_15 Contains similarity to a hypothetical protein F16M14.4 gi|7485589 from Arabid 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: er glycerol-phosphate acyltransferase 0.0
Internal
biog1_v2.0_unigene35254 biogeco1 v2.0 632
• AutoFact: 60S ribosomal protein L18-3 [Arabidopsis thaliana] sp|Q940B0.1|RL183_ARATH RecName: Full=60S ribosomal protein L18-3 gb|AAL07220.1| putative 60S ribosomal protein [Arabidopsis thaliana] gb|AAM67529.1| putative 60S ribosomal protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l18-3-like 0.0
C-terminus
biog1_v2.0_unigene35598 biogeco1 v2.0 440
• AutoFact: 60S ribosomal protein L18-3 [Arabidopsis thaliana] sp|Q940B0.1|RL183_ARATH RecName: Full=60S ribosomal protein L18-3 gb|AAL07220.1| putative 60S ribosomal protein [Arabidopsis thaliana] gb|AAM67529.1| putative 60S ribosomal protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l18-3-like 0.0
N-terminus
biog1_v2.0_unigene35809 biogeco1 v2.0 611
• AutoFact: 60S ribosomal protein L18-3 [Arabidopsis thaliana] sp|Q940B0.1|RL183_ARATH RecName: Full=60S ribosomal protein L18-3 gb|AAL07220.1| putative 60S ribosomal protein [Arabidopsis thaliana] gb|AAM67529.1| putative 60S ribosomal protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l18-3-like 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain