Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco2 v2.0

Name: ARID/BRIGHT DNA-binding domain

Term: IPR001606  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene2269 biogeco2 v2.0 693
AutoFact: Unassigned protein
Blast2go: dna-binding protein 0.0
unknown
biog2_v2.0_unigene3412 biogeco2 v2.0 461
AutoFact: pfam00249, Myb_DNA-binding, Myb-like DNA-binding domain 2.0e-05
Blast2go: dna binding 0.0
Putative coding
biog2_v2.0_unigene7532 biogeco2 v2.0 592
AutoFact: HMG_box domain containing protein 5.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
C-terminus
biog2_v2.0_unigene8931 biogeco2 v2.0 853
AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 0.0
Putative N-terminus
biog2_v2.0_unigene10599 biogeco2 v2.0 419
AutoFact: ARID/BRIGHT DNA-binding domain-containing protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S710_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: arid bright dna-binding domain-containing protein 0.0
C-terminus
biog2_v2.0_unigene10994 biogeco2 v2.0 503
AutoFact: ARID/BRIGHT DNA-binding domain-containing protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7L9D8_ARALL 9.99995e-41
Blast2go: arid bright dna-binding domain-containing protein 1.68156e-44
unknown
biog2_v2.0_unigene11827 biogeco2 v2.0 302
AutoFact: ARID/BRIGHT DNA-binding domain-containing protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RMF8_PHYPA 9.94922e-44
Blast2go: protein 7.00649e-45
Coding
biog2_v2.0_unigene13493 biogeco2 v2.0 530
AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 8.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group b protein 15-like 0.0
C-terminus
biog2_v2.0_unigene15558 biogeco2 v2.0 457
AutoFact: ARID/BRIGHT DNA-binding domain-containing protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RMF8_PHYPA 9.94922e-44
Blast2go: protein 7.00649e-45
Putative coding
biog2_v2.0_unigene16363 biogeco2 v2.0 324
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9S7K7_RICCO 0.0
FL-Next: Isoform 2 of Probable lysine-specific demethylase JMJ14 OS=Arabidopsis thaliana GN=JMJ14 0.0
Blast2go: jumonji domain protein 0.0
Internal
biog2_v2.0_unigene18261 biogeco2 v2.0 366
AutoFact: pfam00249, Myb_DNA-binding, Myb-like DNA-binding domain 2.0e-05
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: dna binding 0.0
Internal
biog2_v2.0_unigene19170 biogeco2 v2.0 360
AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain