Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: SWIB/MDM2 domain

Term: IPR003121  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene117 biogeco2 v2.0 300
AutoFact: SWIb domain-containing protein [Solanum chacoense] 2.0e-22
Blast2go: swib mdm2 domain-containing protein 0.0
unknown
biog2_v2.0_unigene467 biogeco2 v2.0 553
AutoFact: Upstream activation factor subunit UAF30, putative n=1 Tax=Ricinus communis RepID=B9S8L0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swib mdm2 domain containing protein 0.0
C-terminus
biog2_v2.0_unigene3292 biogeco2 v2.0 360
AutoFact: SWI/SNF complex component SNF12 homolog n=2 Tax=Arabidopsis RepID=SNF12_ARATH 0.0
FL-Next: sp=SWI/SNF complex component SNF12 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Internal
biog2_v2.0_unigene7276 biogeco2 v2.0 561
AutoFact: SWI/SNF complex component SNF12 homolog n=2 Tax=Arabidopsis RepID=SNF12_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Putative C-terminus
biog2_v2.0_unigene7313 biogeco2 v2.0 432
AutoFact: SWIb domain-containing protein [Solanum chacoense] 9.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog2_v2.0_unigene7570 biogeco2 v2.0 353
AutoFact: SWIb domain-containing protein [Solanum chacoense] 9.0e-26
Blast2go: protein 0.0
unknown
biog2_v2.0_unigene7940 biogeco2 v2.0 577
AutoFact: SWI/SNF complex component SNF12 homolog n=2 Tax=Arabidopsis RepID=SNF12_ARATH 0.0
FL-Next: sp=SWI/SNF complex component SNF12 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
C-terminus
biog2_v2.0_unigene7968 biogeco2 v2.0 444
AutoFact: SWIB/MDM2 domain-containing protein [Arabidopsis thaliana] ref|NP_001119064.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana] emb|CAB36527.1| putative protein [Arabidopsis thaliana] emb|CAB79536.1| putative protein [Arabidopsis thaliana] gb|AA 9.0e-20
FL-Next: tr=At4g26810; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swib domain-containing protein 5.49429e-24
Complete
biog2_v2.0_unigene8682 biogeco2 v2.0 769
AutoFact: Upstream activation factor subunit UAF30, putative n=1 Tax=Ricinus communis RepID=B9S8L0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swib mdm2 domain containing protein 0.0
N-terminus
biog2_v2.0_unigene10053 biogeco2 v2.0 146
AutoFact: SWIb domain-containing protein [Solanum chacoense] 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swib mdm2 domain-containing protein 0.0
Putative C-terminus
biog2_v2.0_unigene10653 biogeco2 v2.0 335
AutoFact: SWIb domain-containing protein [Solanum chacoense] 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swib mdm2 domain-containing protein 0.0
N-terminus
biog2_v2.0_unigene13444 biogeco2 v2.0 196
AutoFact: SWIB complex BAF60b domain-containing protein [Arabidopsis thaliana] gb|AAL24145.1| unknown protein [Arabidopsis thaliana] gb|AAM14205.1| unknown protein [Arabidopsis thaliana] gb|AEE84600.1| SWIB complex BAF60b domain-containing protein [Arabidopsis thal 0.0
Blast2go: brg-1 associated 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain